Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03293 ATGGCTGGTAATTGTTCAGAAGGATTAGGTGATGATTTCTTTGAGCAGATCTTAGCAGTGCCTGAGAACGGAGTTGGATATGGAGGAGTGTTGCAATTGGGGTCCACACCTCATGGTGGTTCTTTGAGAGGAGGAGGAGGAGGAATAATGCCATTAGGGTTGAATTTGGAGCAAAATCATCATGGGTTTCTCAGGCATCAAGATGCAACACGGTTTGTTGATAACGTTGTTGATGTTGAAGGAAATATTACTAATAATAACAACAACAACCATCATCATCTTCGTCTTCATGATATCAATAACAACAACAACCACAACAATATCACTTCTTCTTCACCTTCTTCTACTCCCGGAATCACTGATAGGGATTCGATGCAGATGAGGGGTTTGTTTTCAACGTTTGGACAATTGCATACTCCTACTCATGCTCAGCCTGTACGCCCCATGCTTCAATCTCCACCTCCTCAACCCCAACTTCACCTTCACCATCAACACCAACAGCACTTTCAGAGCCAGCAACCAAATCCAGCATCTGTTACAGCCATGCCACAGCCACCTGGCATCCGTCCTCGAGTGCGAGCAAGAAGAGGCCAAGCCACAGACCCCCACAGCATTGCTGAGCGGCTGCGTCGGGAAAGAATCGCTGAAAGAATGAAGGCATTGCAGGAATTAGTTCCCAGCATCAACAAGACTGACAAAGCGGCGATGCTTGATGAAATTGTTGATTATGTGAAGTTCCTTAGGCTCCAAGTTAAGGTCTTGAGCATGAGTAGACTTGGTGGAGCTGGTGCAGTTGCTCAGCTTGTAGCTGATGTTCCTGTTTCTGCAGTGGAGGGGGAGGACATAGAAGGTGGAACCAACCAGCAAGCCTGGGCGAAATGGTCGAACGATGGAACAGAACAACAAGTTGCTAAACTTATGGAAGAAGATGTTGGTGCAGCTATGCAACTTCTTCAATCCAAGGCACTTTGCATCATGCCTATATCTCTAGCTTCAGCAATTTTTCGTATGCCTCAATCAGACTCATCAACAATCATCAAGCCTGAATCAAACAACCACACATAG 1065 0.4582 MAGNCSEGLGDDFFEQILAVPENGVGYGGVLQLGSTPHGGSLRGGGGGIMPLGLNLEQNHHGFLRHQDATRFVDNVVDVEGNITNNNNNNHHHLRLHDINNNNNHNNITSSSPSSTPGITDRDSMQMRGLFSTFGQLHTPTHAQPVRPMLQSPPPQPQLHLHHQHQQHFQSQQPNPASVTAMPQPPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDKAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPVSAVEGEDIEGGTNQQAWAKWSNDGTEQQVAKLMEEDVGAAMQLLQSKALCIMPISLASAIFRMPQSDSSTIIKPESNNHT 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03293 354 SMART finulus 204 253 IPR011598 GO:0046983
Mepo4g03293 354 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 196 257 IPR036638 GO:0046983
Mepo4g03293 354 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 87 332 - -
Mepo4g03293 354 Pfam Helix-loop-helix DNA-binding domain 203 247 IPR011598 GO:0046983
Mepo4g03293 354 MobiDBLite consensus disorder prediction 103 123 - -
Mepo4g03293 354 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 198 247 IPR011598 GO:0046983
Mepo4g03293 354 MobiDBLite consensus disorder prediction 152 202 - -
Mepo4g03293 354 FunFam Transcription factor bHLH66 195 260 - -
Mepo4g03293 354 Gene3D - 193 255 IPR036638 GO:0046983
Mepo4g03293 354 MobiDBLite consensus disorder prediction 157 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03293 Mepo-Chr4 42501656 42508789 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03293 172 351 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 76.374 1.83e-80 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo4g03293 HLH 2.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03293 - - vun:114189791 397.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03293 4 42501656 42508789 Mepo4g03293 4 42501656 42508789 ECH