Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03292 ATGACTAACGTTGGGGATGCAGAGAGAGACAAGTACAGCTTGATAAATTTTGAGGAGACCGAGTTACGACTCGGTCTTCCAGGAGCTGGTGATCACGGCGAATCACCAGTTAAAAATAGTTGTGGAAAGAGAGGTTTCTCAGAAACAGCTAATGTTGATTTGAAGCTTAATCTTTCTCCTATAAATGATTCTGTTTCATCTTCTTCAACTATAGCTTCTGTAGCTGAAAACAAAGCCAAAGACACTACAACTTCTGCTACTGTTGCTCCTCCTCCTCGTGCTAAGGCACAAGTTGTGGGATGGCCACCAGTTAGATCCTTTAGAAAGAACATAGTAAATGTTCAAAAGAGCAATAATGAATCAGAAGTAGATAAGAGCACAAGTGGTGGTGGTGGGAATGGAGCATTTGTTAAGGTGAGCATGGATGGTGCACCATATCTACGTAAGGTGGACCTTAAATTGTACAAGAGTTACCAAGAGCTGTCAGATGCGCTGGCTAAAATGTTTAGTTCCTTCACAATTGACAATTGTGGGTCCCAAGTTACCAAAGACTTCATGAATGAAAGCAAATTGATTGACCTTTTGAACGGTTCTGATTATGTACCAACATATGAAGACAAAGATGGTGATTGGATGCTTGTTGGTGATGTTCCTTGGGAAATGTTCGTTCAATCGTGCAAGCGTCTTCGCATAATGAAAGGTTCTGAGGCAATTGGGCTAGCACCAAGAGCAGTGGAAAAATGCAAGAACAGAAGCTGA 759 0.4163 MTNVGDAERDKYSLINFEETELRLGLPGAGDHGESPVKNSCGKRGFSETANVDLKLNLSPINDSVSSSSTIASVAENKAKDTTTSATVAPPPRAKAQVVGWPPVRSFRKNIVNVQKSNNESEVDKSTSGGGGNGAFVKVSMDGAPYLRKVDLKLYKSYQELSDALAKMFSSFTIDNCGSQVTKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVQSCKRLRIMKGSEAIGLAPRAVEKCKNRS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03292 252 SUPERFAMILY CAD & PB1 domains 126 233 - -
Mepo4g03292 252 Gene3D - 131 246 - -
Mepo4g03292 252 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 16 239 IPR003311 GO:0005634|GO:0006355
Mepo4g03292 252 MobiDBLite consensus disorder prediction 77 97 - -
Mepo4g03292 252 Pfam AUX/IAA family 19 243 IPR033389 -
Mepo4g03292 252 FunFam Auxin-responsive protein 130 244 - -
Mepo4g03292 252 ProSiteProfiles PB1 domain profile. 134 234 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03292 Mepo-Chr4 42470834 42474449 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03292 138 242 B3 DNA Binding Superfamily AT4G23980 33.333 3.57e-08 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mepo4g03292 AUX_IAA 1.9e-86 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03292 K14484 - cave:132171332 346.28