Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03280 ATGTCTCCCACCGCCGCTGCTCAGACCAAGCCCAAGAAAACCGTTGCAGCAAAGAAGCCTCTCTCTCATCCTACTTACGCTGAGATGATAACTGAAGCTATTGTGAGTTTGAAAGAACGAACTGGTTCAAGCCAACACGCGATAACAAAATTCATCGAAGAGAGGCATAAGGATTTATCTCCAACATTCCGCAAACTCATTCTTCTTCATCTGAAGAAATCTGTGGCTTCTGGCAAGCTCGTGAAGGTGAAAAACTCCTTCAAAATCGCTCCGGCGGCGGCAAAAACTGCTCCGGTGAAGGCCACTACTGCTCCTGCTAAGAAGGCTAAGGCTGTTACCAAGCCAGCCGCTAAGGCTGCAACTAAGCCGAAGGCTAAAGCTGCTGTGAAGCCGAAAGCTGCCGCAAAGCCAAAAGCAGCGGCGAAGCCTAAGGCTGTTTTGAAGCCGAAAGCGAAGAGTGTTAAGGCTACGCCGGTGAAGAAAGCGGCGAAGAAGGTGGTTGCGAAGAAGCCGAAGAGTGTTAAGACTCCGGTGAAAAAAGCTAAGAAGTGA 552 0.4964 MSPTAAAQTKPKKTVAAKKPLSHPTYAEMITEAIVSLKERTGSSQHAITKFIEERHKDLSPTFRKLILLHLKKSVASGKLVKVKNSFKIAPAAAKTAPVKATTAPAKKAKAVTKPAAKAATKPKAKAAVKPKAAAKPKAAAKPKAVLKPKAKSVKATPVKKAAKKVVAKKPKSVKTPVKKAKK 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03280 183 MobiDBLite consensus disorder prediction 1 20 - -
Mepo4g03280 183 SUPERFAMILY "Winged helix" DNA-binding domain 19 100 IPR036390 -
Mepo4g03280 183 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 22 91 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mepo4g03280 183 PANTHER HISTONE H1 4 172 - -
Mepo4g03280 183 MobiDBLite consensus disorder prediction 143 183 - -
Mepo4g03280 183 MobiDBLite consensus disorder prediction 98 183 - -
Mepo4g03280 183 Pfam linker histone H1 and H5 family 23 89 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mepo4g03280 183 Gene3D - 17 101 IPR036388 -
Mepo4g03280 183 CDD H15 22 101 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mepo4g03280 183 PRINTS Histone H5 signature 176 183 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mepo4g03280 183 PRINTS Histone H5 signature 118 132 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mepo4g03280 183 PRINTS Histone H5 signature 154 171 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mepo4g03280 183 PRINTS Histone H5 signature 9 30 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mepo4g03280 183 PRINTS Histone H5 signature 36 53 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mepo4g03280 183 SMART h15plus2 20 86 IPR005818 GO:0000786|GO:0003677|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03280 Mepo-Chr4 42362271 42363217 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03280 9 89 Single Myb Histone (SMH) Gene Family AT1G72740 33.333 1.13e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03280 K11275 - gmx:100810590 125.561