Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03274 ATGGGGACTCCAGCGAATATTATTGTGGGTTCTCATGTCTGGATTGAAGATCCAGAGGAAGCTTGGATTGGCGGATACGTATCAAAAATCAACGAAAAGGATGCTGAAGTTGACACTACCGATGGAAAAAAGGTTGTTGCAAATTTATCAAAAATACTTCCCAAGGATACGGAAGTTCATCCTGGTGGAGTGGATAATATGACTAAACTGTCCTATTTGCACGAGCCTGGAGTCCTGCAGAACTTAAAAGCTAGATATGAATTGAATAAAATATATACTTATACCGGAAACATTCTGATTGCAATAAATCCATTCCAAAGGCTGCCTCATATTTATGGTGCGCACATGATGCAACGATACATTGGAGAGCCACTTGGAGAATTAAGCCCTCATGTATTTGCAGTAGCTGAGGTTGCATATAGGGCGATGGTTAATGAAGGGAAAAACAATTCAATTCTGGTCAGTGGGGAAAGTGGAGCTGGTAAAACTGAAACTACAAAAATGATTATGCAATTCCTAGCTTTCCTAGGTGGTAGAGCTGTGACTGAAGGAAGAACAGTTGAACAACAAGTTCTTGAATCAAATCCAGTTCTGGAAGCATTTGGCAACGCCAAAACTGTCAGGAACAACAATTCCAGCCGTTTTGGTAAATTTGTTGAGATCCAATTTGATAAGAGCGGAAGAATCTCAGGAGCAGCCATCCGAACATACCTTCTAGAGAGATCTCGGGTCTGTCAAATTAATGATCCTGAACGAAACTACCACTGCTTCTATCTTCTTTTCGCCGCACCACAGGAGGAAATTGAGAAATACAAATTAGGAAATCCTAAATCGTTTCACTACCTTAACCAGTCACAATGCTATGAACTGGCTGATGTAAATGATGCTCATGAGTATCTCGCCACCCGTAGAGCTATGGGTATTGTTGGAATAGATCACAAAGATCAGGAAGCCATTTTCAGAATTGTTGCTGCAATTCTTCATCTTGGTAATATTGATTTTGCCAAAGGAAAGGAAACCGACTCATCAATTCCCAAAGATAGCAACGCCGAATTCCACCTGAAAACGGCCGCTGAGCTTCTGATGTGTGATGCTGATGCCTTGGAAGATGCATTATGTAAGCGTGTCATGATCACTCCTGAAGAAGTTATAAAACGGAGCCTTGACCCGGGAAGTGCAACAGTCAGTAGAGATGGACTGGCAAAAACAATTTATTCTCGGCTATTTGATTGGCTGGTGGACAAGATTAATAATTCAATTGGACAAGACCCCAATTCTGAATGTTTGATTGGGGTCCTTGATATCTATGGTTTCGAAAGCTTTAAATTGAACAGTTTTGAGCAGTTCTGCATTAATTTCACAAATGAAAAGTTGCAGCAACATTTCAATCAGCATATGTTCAAAATGGAACAAGAAGAATATGCAAAGGAGGAGATCAATTGGAGCTACATTGAATTTGTGGACAACAAAGATGTGTTGGACCTTATTGAAAAGAAACCCGGAGGAATCATTTCTCTCCTCGACGAAGCTTGTATGTTTCCAAAGTCAACACATGAAACATTTGCAAACAAGCTTTATCAAACATTTAAGAATAACAAGCGCTTTATTAAGCCAAAATTGTCTCAAACAGATTTCACCATTGCCCATTATGCTGGAGAGGTGACATACCAATCTGACCATTTTTTAGACAAAAACAAAGATTATGTGGTTCCTGAACATCAAGATTTATTGATTGCTTCCAAATGTCCTTTTGTATCTACCCTTTTTCCACCACTTCCAGAAGAGACATCAAAATCTTCCAAATTTTCATCAATAGGTTCTCGTTTTAAGCTACAGCTACAGCAGCTAATGGAAACATTAAATTCAACAGAACCCCATTACATTAGATGTGTGAAACCAAACAACCTCCTCAAGCCTGCAATTTTTGAGAATGTCAACATTATGCATCAACTTCGTTGTGGTGGTGTATTAGATGCTATCAGAATCAGTTGTGCTGGCTATCCTACACGCCGCCCGTTCTTTGAATTTGCGAACAGATTTGGTCTCCTTGCCCCAGAGGCCATAGAAGCAAACTGTAATGAAAAGAATGCTTGCCAAAAGATTCTGGAAAAGACGGGGCTTAAAGGATATCGGATTGGAAAAACAAAGGTATTCTTGAGAGCAGGTCAGATGGCTGAACTAGATGCACAGAGAGCTCAAGTACTTGGTAATGCAACAAAAGTTATCCAACAGCACATACGAACCCATCAAGCTCGGAAACAATATCTTGCATTGCAAAAGAAGACCATATATGTGCAGTCTCGGTGGAGAGGAAGATTCGCATTCAAACTCTATGAGAAAATGAGAAGGGAGGTCGCTGCTGTGAAAATTCAAAAGAACATACGCAGTTACGAAACTAGGAAGGTGTATAAAAAACTTCATATGTCAGTACTTACTTTGCAAACAGCTTTAAGGGCCATTGCTGCTCGCAAGGAATTCAGGTTTAGGAAACATACCAAAGCTTCCATCATTATTCAGGCTCAGTGGCGGTGCCACAAAGCGGCCTTACAATATAAGAGGCTAAAAAAAGGTTCAATAGTTACACAATGTAGATGGAGGGGGCGTTTAGCTAAGGGAGAACTTAGGAAACTGAAAATGGATGCAAGAGATACTGGCGCACTTCGTGAAGCAAAGAGTATGCTTGAAAAAAAAGTGAAGGAACTTACTTGGCATCTCCAACTGGAAAAAGGTTTAAAGGCTGCAAGAGATACTGGCCCACTTAAAGAAGCAAAGAGTAAGCTTGAAAAACAGGTGGGGGAACTTAAATGGCGTCTCCAACTGGAAAAAGGTTTAAGGACAAATCTAGCAGAATTCAAAGCACAGGAGATAGCAAAACTGCAGAATTCATTGCAGGAGATGAAGATAAAAGTTGATGAAACAAATGCTCTGCTCCTCATGGAGCGAGAGAATGCAAAGAAAGCTATTGAAGTAACATCTCCTGTCATTAAAGAAGCAATGGTTCTCGTTGAAGATAAAGAGAAGATTAAGAGACTGAGAATGGAAGTTGACTACCTAAAGACTTCACTCAAGTTAGAGAAACTGAAATGCAACAACTTTGAAAGAAAATATAACGAAGCTAAAATTTGTAGTGAAGAAAGAGGTAAAAGATTAGAAGACACGGAGAAGAAGCTTCGTCAGCTCCAAGAATCAATGATCAGGTTTACTTCTCAAAAGAATTTCTAG 3222 0.3985 MGTPANIIVGSHVWIEDPEEAWIGGYVSKINEKDAEVDTTDGKKVVANLSKILPKDTEVHPGGVDNMTKLSYLHEPGVLQNLKARYELNKIYTYTGNILIAINPFQRLPHIYGAHMMQRYIGEPLGELSPHVFAVAEVAYRAMVNEGKNNSILVSGESGAGKTETTKMIMQFLAFLGGRAVTEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQINDPERNYHCFYLLFAAPQEEIEKYKLGNPKSFHYLNQSQCYELADVNDAHEYLATRRAMGIVGIDHKDQEAIFRIVAAILHLGNIDFAKGKETDSSIPKDSNAEFHLKTAAELLMCDADALEDALCKRVMITPEEVIKRSLDPGSATVSRDGLAKTIYSRLFDWLVDKINNSIGQDPNSECLIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHMFKMEQEEYAKEEINWSYIEFVDNKDVLDLIEKKPGGIISLLDEACMFPKSTHETFANKLYQTFKNNKRFIKPKLSQTDFTIAHYAGEVTYQSDHFLDKNKDYVVPEHQDLLIASKCPFVSTLFPPLPEETSKSSKFSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNNLLKPAIFENVNIMHQLRCGGVLDAIRISCAGYPTRRPFFEFANRFGLLAPEAIEANCNEKNACQKILEKTGLKGYRIGKTKVFLRAGQMAELDAQRAQVLGNATKVIQQHIRTHQARKQYLALQKKTIYVQSRWRGRFAFKLYEKMRREVAAVKIQKNIRSYETRKVYKKLHMSVLTLQTALRAIAARKEFRFRKHTKASIIIQAQWRCHKAALQYKRLKKGSIVTQCRWRGRLAKGELRKLKMDARDTGALREAKSMLEKKVKELTWHLQLEKGLKAARDTGPLKEAKSKLEKQVGELKWRLQLEKGLRTNLAEFKAQEIAKLQNSLQEMKIKVDETNALLLMERENAKKAIEVTSPVIKEAMVLVEDKEKIKRLRMEVDYLKTSLKLEKLKCNNFERKYNEAKICSEERGKRLEDTEKKLRQLQESMIRFTSQKNF 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03274 1073 FunFam Class V myosin 439 575 - -
Mepo4g03274 1073 Pfam Myosin N-terminal SH3-like domain 9 51 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mepo4g03274 1073 ProSiteProfiles IQ motif profile. 783 812 IPR000048 GO:0005515
Mepo4g03274 1073 Coils Coil 949 976 - -
Mepo4g03274 1073 CDD MYSc_Myo11 76 720 IPR036018 -
Mepo4g03274 1073 Gene3D - 786 832 - -
Mepo4g03274 1073 Gene3D - 833 882 - -
Mepo4g03274 1073 Gene3D - 735 785 - -
Mepo4g03274 1073 Gene3D Myosin VI head, motor domain, U50 subdomain 311 601 - -
Mepo4g03274 1073 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 785 IPR027417 -
Mepo4g03274 1073 Gene3D Kinesin motor domain 65 662 IPR036961 -
Mepo4g03274 1073 ProSiteProfiles IQ motif profile. 806 835 IPR000048 GO:0005515
Mepo4g03274 1073 Pfam IQ calmodulin-binding motif 832 852 IPR000048 GO:0005515
Mepo4g03274 1073 Pfam IQ calmodulin-binding motif 786 804 IPR000048 GO:0005515
Mepo4g03274 1073 Pfam IQ calmodulin-binding motif 738 755 IPR000048 GO:0005515
Mepo4g03274 1073 Gene3D - 252 310 - -
Mepo4g03274 1073 Gene3D - 439 623 - -
Mepo4g03274 1073 Coils Coil 1043 1070 - -
Mepo4g03274 1073 FunFam Myosin heavy chain 252 307 - -
Mepo4g03274 1073 FunFam unconventional myosin-Va 833 881 - -
Mepo4g03274 1073 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo4g03274 1073 FunFam Myosin 2 312 429 - -
Mepo4g03274 1073 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mepo4g03274 1073 ProSiteProfiles IQ motif profile. 737 762 IPR000048 GO:0005515
Mepo4g03274 1073 Gene3D - 667 730 - -
Mepo4g03274 1073 ProSiteProfiles IQ motif profile. 831 858 IPR000048 GO:0005515
Mepo4g03274 1073 SMART iq_5 830 852 IPR000048 GO:0005515
Mepo4g03274 1073 SMART iq_5 734 756 IPR000048 GO:0005515
Mepo4g03274 1073 SMART iq_5 853 875 IPR000048 GO:0005515
Mepo4g03274 1073 SMART iq_5 782 804 IPR000048 GO:0005515
Mepo4g03274 1073 SMART iq_5 805 827 IPR000048 GO:0005515
Mepo4g03274 1073 SMART iq_5 757 779 IPR000048 GO:0005515
Mepo4g03274 1073 ProSiteProfiles IQ motif profile. 854 883 IPR000048 GO:0005515
Mepo4g03274 1073 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo4g03274 1073 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Mepo4g03274 1073 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 786 882 IPR027417 -
Mepo4g03274 1073 SMART MYSc_2a 56 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo4g03274 1073 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo4g03274 1073 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo4g03274 1073 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo4g03274 1073 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo4g03274 1073 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo4g03274 1073 PANTHER MYOSIN 54 1005 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03274 Mepo-Chr4 42286644 42305800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03274 1 1072 Myosins gene family AT1G54560 73.601 0.0 1644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03274 K10357 - gmx:100816792 1734.92