Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03271 ATGCAAACTCATTTGTTTCTCTTCTTTTGTTACATTGTTGTCTCTCTCATTTTTACTGAGAGAGCTCAAAGTGCAACAAATGATGAATTGTCAACTCTTCTCTCAATCAAATCTAGTCTCATTGATCCAATGAATCATCTAAAGGATTGGCAGCCACCGAGCGACGCGGCGCAGTGGCAAAGTCGGCTCCATTGTAACTGGACTGGAATTGGTTGCAACACTAAAGGCTTTGTAGAGAGTCTTGAACTCTATAATATGAACTTAAGTGGCATTGTTTCGAACCATATTCAATCCCTTTCAAGTTTATCTTATTTCAACATAAGTTGTAACAACTTTGCTTCAACACTTCCTAAATCACTTTCCAACCTCACTTCTCTAAAAAGCTTTGATGTGAGCCAAAACTACTTCACTGGAAGCTTTCTGACCGGTTTCGGAAGAGCAGCAGAGTTGAGATCAATCAATGCATCAAGCAATGAATTTTCAGGTCTTCTTCCTGAAGATATCGAAAATGCAACATTGCTCGAAAGTTTTGATTTTCGTGGAAATTACTTTGTAAGTCCAATTCCAAAGAGTTTTAAAAATTTGCAAAATCTTAAATTTCTAGGCCTTTCAGGCAATAACTTCACAGGGAAGATTCCAGAATATCTTGGTGAACTTAGTTCTTTAGAGACATTGATTATGGGATACAATGAATTTGAAGGTGAGATTCCTGCAGAATTTGGCAACATGACAAATCTTCAATATCTTGATTTGGCAGTTGGAACTCTCAGTGGACAAATTCCACCTGAATTAGGTAAGCTCAAGAATCTTACTACAATTTACTTATACCGAAACAAATTCACTGCAAAAATTCCGCCTCAACTTGGCAACATTATGTCACTAGCATTTCTAGACCTCTCTGATAATCAGATCACAGGAGAAATACCAGAAGAGCTTGCTAAATTGGAAAACTTACATCTTTTGAATTTGATGAGCAATAAACTAACTGGTCCTGTACCAAAGAAGCTTGGTGAACTGAAAAAGTTGCAGGTTCTTGAGTTATGGAAAAATTCTTTAGAAGGTTCTTTGCCAATGAACCTTGGAAGGAATTCTCCTTTGCAGTGGTTAGACGTGTCCTCTAACTCATTGTCAGGTGAGATCCCTCCTGGTTTGTGTACAACAGGCAATCTAACTAAATTAATCCTCTTCAACAATTCGTTCTCCGGTCCAATTCCGAGTGGACTTTCAAACTGTTCGTCGTTGGTGCGTGTTCGGATTCAAAACAATCTTATTTCCGGAACTATTCCGGTTGGATTTGGCAGTCTTCCGAGCCTTCAACGGCTGGAGTTGGCAAAGAACAACCTCAGTGGTCAAATTCCTATAGATATCACCTCTTCCACATCGCTTTCCTTCATTGATGTATCTTGGAACCACCTTGAGTCATCTCTACCTTCAGAAATTCTTTCTATTCCAACCCTTCAAACCTTCATTGCCTCTCACAACAATCTTGGAGGAACTATACCTGATGAGTTCCAAGGATGTCCATCTCTCTCTGTGCTTGATCTTTCAAATGCAAATATCTCCAGCGCAATCCCAAAAAGTATAGCTTCTTGTCAAAAATTAGTCAACCTTAACCTTAGAAACAATCATTTGACAGGTGAAATACCAAATTCAATCACAAACATGCCTACCTTATCAGTTCTTGATCTGTCCAACAATTCGCTGACCGGTCGGATACCTGAAAACTTCGGAAGCTCCCCGGCTCTTGAAACAATGAACTTGTCCTATAACAAACTGGAAGGGCCGGTACCCTCAAATGGAATTATACTGACCATGAATCGTAACGATTTTGTCGGCAATGCCGGTCTTTGTGGTGGTATTCTCCCTCCGTGTTCTCAGAGTTCAACCGTGACAAGTCAGAAAAGAAGCTCACACATTAGTCACATTGTTATTGGTTTTGTGACCGGAATTTCGGTCATTTTATCCCTTGGTGCAGCATATTTTGGAGGGAAATGGTTGTACAATAAATCTTATATGTATAACAGTTTCATCTATGATTGGTTCAAACATAACAATGAAGATTGGCCTTGGAGGTTAGTAGCTTTTCAAAGGATCAGTTTCACGAGTAGTGAGATCCTAACTTGCATAAAGGAATCAAATGTCATAGGCATGGGTGGTGCTGGCATTGTTTACAAAGCTGAAATCCATAAACCTCAGATAACAGTAGCAGTGAAGAAACTATGGAGGTCAAGCCCAGATATAGAAAATGGGAATGATGTGTTAAGAGAAGTGGAACTCTTGGGGAGACTAAGGCATAGGAATATTGTAAGGCTATTAGGGTATGTTCACAATGAAAGGGATGTGATAATGGTTTATGAGTACATGATTAATGGTAACCTTGGAACAGCACTGCATGGTGAACAATCTGCAAGGTTGCTTGTAGATTGGGTCTCAAGGTATAACATAGCTCTTGGAGTTGCACAAGGGATGAACTACCTGCACCATGATTGTCATCCACCAGTTATTCACAGGGATATCAAGTCTAATAACATACTCCTTGACGCAAATTTGGAGGCAAGGATAGCAGATTTCGGTTTAGCAAGGATGATGGTTCAAAAGAATGAGACTGTTACAATGGTGGCTGGATCTTACGGTTATATTGCACCAGAATATGGATACACTCTGAAGGTTGATGAGAAGATTGACATATACAGTTATGGAGTGGTACTTTTGGAGCTGCTAACTGGTAAAATGCCATTAGACCCTACTTTTGAAGAAGCCGTAGACATAGTCGAATGGATACAAAAGAAGAGAAACAATAAAGCCCTGTTAGAAGCACTAGATCCCACCATAGCTGGTCAGTGCAAACATGTTCAGGAAGAGATGCTTCTTGTCCTGCGGATTGCACTTCTATGCACTGCAAAGCTTCCCAAGGAAAGACCATCCATGAGAGACATCATCACAATGCTTGGAGAGGCGAAGCCAAGAAGGAAAAGCATTTGTGGCAACGGAAGGCAAGAGAGTAGCATGGAAAAAGGAACAATCTTTACCACATCCCCAATAGCAAGTCTTTTGTAG 3057 0.4014 MQTHLFLFFCYIVVSLIFTERAQSATNDELSTLLSIKSSLIDPMNHLKDWQPPSDAAQWQSRLHCNWTGIGCNTKGFVESLELYNMNLSGIVSNHIQSLSSLSYFNISCNNFASTLPKSLSNLTSLKSFDVSQNYFTGSFLTGFGRAAELRSINASSNEFSGLLPEDIENATLLESFDFRGNYFVSPIPKSFKNLQNLKFLGLSGNNFTGKIPEYLGELSSLETLIMGYNEFEGEIPAEFGNMTNLQYLDLAVGTLSGQIPPELGKLKNLTTIYLYRNKFTAKIPPQLGNIMSLAFLDLSDNQITGEIPEELAKLENLHLLNLMSNKLTGPVPKKLGELKKLQVLELWKNSLEGSLPMNLGRNSPLQWLDVSSNSLSGEIPPGLCTTGNLTKLILFNNSFSGPIPSGLSNCSSLVRVRIQNNLISGTIPVGFGSLPSLQRLELAKNNLSGQIPIDITSSTSLSFIDVSWNHLESSLPSEILSIPTLQTFIASHNNLGGTIPDEFQGCPSLSVLDLSNANISSAIPKSIASCQKLVNLNLRNNHLTGEIPNSITNMPTLSVLDLSNNSLTGRIPENFGSSPALETMNLSYNKLEGPVPSNGIILTMNRNDFVGNAGLCGGILPPCSQSSTVTSQKRSSHISHIVIGFVTGISVILSLGAAYFGGKWLYNKSYMYNSFIYDWFKHNNEDWPWRLVAFQRISFTSSEILTCIKESNVIGMGGAGIVYKAEIHKPQITVAVKKLWRSSPDIENGNDVLREVELLGRLRHRNIVRLLGYVHNERDVIMVYEYMINGNLGTALHGEQSARLLVDWVSRYNIALGVAQGMNYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLARMMVQKNETVTMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELLTGKMPLDPTFEEAVDIVEWIQKKRNNKALLEALDPTIAGQCKHVQEEMLLVLRIALLCTAKLPKERPSMRDIITMLGEAKPRRKSICGNGRQESSMEKGTIFTTSPIASLL 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03271 1018 FunFam MDIS1-interacting receptor like kinase 1 709 791 - -
Mepo4g03271 1018 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 239 984 - -
Mepo4g03271 1018 SUPERFAMILY RNI-like 259 598 - -
Mepo4g03271 1018 Pfam Leucine rich repeat N-terminal domain 27 73 IPR013210 -
Mepo4g03271 1018 Pfam Leucine rich repeat 533 592 IPR001611 GO:0005515
Mepo4g03271 1018 Pfam Leucine rich repeat 413 472 IPR001611 GO:0005515
Mepo4g03271 1018 Gene3D Transferase(Phosphotransferase) domain 1 792 1005 - -
Mepo4g03271 1018 Pfam Leucine Rich repeat 292 308 IPR001611 GO:0005515
Mepo4g03271 1018 Gene3D Ribonuclease Inhibitor 318 381 IPR032675 -
Mepo4g03271 1018 Gene3D Ribonuclease Inhibitor 259 317 IPR032675 -
Mepo4g03271 1018 Gene3D Ribonuclease Inhibitor 28 148 IPR032675 -
Mepo4g03271 1018 PRINTS Leucine-rich repeat signature 555 568 - -
Mepo4g03271 1018 PRINTS Leucine-rich repeat signature 294 307 - -
Mepo4g03271 1018 Gene3D Phosphorylase Kinase; domain 1 708 791 - -
Mepo4g03271 1018 SMART LRR_typ_2 435 459 IPR003591 -
Mepo4g03271 1018 SMART LRR_typ_2 99 123 IPR003591 -
Mepo4g03271 1018 SMART LRR_typ_2 339 363 IPR003591 -
Mepo4g03271 1018 SMART LRR_typ_2 555 579 IPR003591 -
Mepo4g03271 1018 SMART LRR_typ_2 267 291 IPR003591 -
Mepo4g03271 1018 SMART LRR_typ_2 195 219 IPR003591 -
Mepo4g03271 1018 ProSiteProfiles Protein kinase domain profile. 709 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g03271 1018 Gene3D Ribonuclease Inhibitor 382 628 IPR032675 -
Mepo4g03271 1018 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 183 283 - -
Mepo4g03271 1018 Gene3D Ribonuclease Inhibitor 156 258 IPR032675 -
Mepo4g03271 1018 SUPERFAMILY L domain-like 64 310 - -
Mepo4g03271 1018 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 366 628 - -
Mepo4g03271 1018 SUPERFAMILY Protein kinase-like (PK-like) 703 983 IPR011009 -
Mepo4g03271 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 834 846 IPR008271 GO:0004672|GO:0006468
Mepo4g03271 1018 SMART serkin_6 709 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g03271 1018 Pfam Protein kinase domain 711 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g03271 1018 FunFam MDIS1-interacting receptor like kinase 1 792 1001 - -
Mepo4g03271 1018 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 26 182 - -
Mepo4g03271 1018 ProSiteProfiles Leucine-rich repeat profile. 293 316 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03271 Mepo-Chr4 42247630 42250993 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03271 4 1018 Receptor kinase-like Gene Family AT1G08590 61.665 0.0 1261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo4g03271 Pkinase 6.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03271 - - gmx:100793873 1667.13