Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03253 ATGTGCGAAACCCTAAAAACTAAGTACCAACTCAGCGAGGAGATCGGTCGTGGCCGTTTCGGTACCATTTTCCGGTGCTACCACCCTGACTCCGCCGTCCCAACCGCCGTCAAAGTCATCGACAAATCTCTTCTCGCCGATTCCACTGATCGTGAGTGTCTCCAAAACGAACCAAAATTCCTCTCTCTTCTTTCACCTCACCCTAACATCCTTCAAATCTTCGACGTTTTTGAAAACGACGATTTCTTATCCATCGTCTTGGAGCTTTGTCAACCTCACACTCTCCTCGACCGTATCGTCGATAATCCTTTAACGGAACAACAAGCCGCTGCGATTATCAAAAAGCTTCTCGAAGCTGTTGTTCACTGCCACCGTCTCGGTGTCGCTCATCGCGATATCAAGCCGGATAACATTCTCTTCGATTCTGAAGATAATCTCAAATTAGCTGATTTCGGTTCCGCTGAATGGTTCGGAGACGGCGAGAAAATGAGTGGAGTCGTCGGAACACCGTATTACGTGGCACCGGAGGTTCTTTTAGGAAGAGATTATACAGAGAAAGTTGATGTGTGGAGCTGTGGGGTGCTTTTGTACATAATGTTGAGCGGGATGCCTCCGTTTTACGGTGATTCTACGGCTGAGATTTTTGAAGCAGTTGTTAGAGCGAATCTCAGGTTTCCTTCTAGAGTCTTCCGTTCTGTTTCTTCTTCTGCTAAGGATCTGTTGAGGAAAATGATGTGTAGAGATGATTCTAGAAGATTTTCTGCTGAACAAGCCTTAGCGCATCCTTGGATAGTGAGTGGAGGTGAAGCAATGATGTAG 819 0.4652 MCETLKTKYQLSEEIGRGRFGTIFRCYHPDSAVPTAVKVIDKSLLADSTDRECLQNEPKFLSLLSPHPNILQIFDVFENDDFLSIVLELCQPHTLLDRIVDNPLTEQQAAAIIKKLLEAVVHCHRLGVAHRDIKPDNILFDSEDNLKLADFGSAEWFGDGEKMSGVVGTPYYVAPEVLLGRDYTEKVDVWSCGVLLYIMLSGMPPFYGDSTAEIFEAVVRANLRFPSRVFRSVSSSAKDLLRKMMCRDDSRRFSAEQALAHPWIVSGGEAMM 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03253 272 SMART serkin_6 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g03253 272 PIRSF ILK 2 260 - -
Mepo4g03253 272 SUPERFAMILY Protein kinase-like (PK-like) 5 266 IPR011009 -
Mepo4g03253 272 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
Mepo4g03253 272 CDD STKc_CAMK 8 263 - -
Mepo4g03253 272 FunFam Phosphoenolpyruvate carboxylase kinase 2 1 272 - -
Mepo4g03253 272 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Mepo4g03253 272 Gene3D Transferase(Phosphotransferase) domain 1 94 271 - -
Mepo4g03253 272 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Mepo4g03253 272 Pfam Protein kinase domain 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g03253 272 PANTHER SERINE/THREONINE-PROTEIN KINASE 5 269 - -
Mepo4g03253 272 FunFam Phosphoenolpyruvate carboxylase kinase 1 1 91 - -
Mepo4g03253 272 ProSiteProfiles Protein kinase domain profile. 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03253 Mepo-Chr4 42043727 42045098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03253 3 270 EF-hand Containing Proteins AT1G50700 39.706 6.20e-70 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mepo4g03253 Pkinase 1.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03253 - K08794 gmx:548089 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03253 4 42043727 42045098 Mepo4g03253 4 42043727 42045098 ECH