Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03247 ATGGCGAACAGGTGGTGGACCGGACCGGTTGGTCTAGGAGGGATGGACAACTCAGTAACCTCCTCTCCACTAGGAAAACCGGATCTGGGCTTCTCCATGAACCAAAGTGCTGTAACAGGAGTGAACAACATGAACAACAACAACAACAATGAAGAAGAAGAAGAAGATGAGAAAGAGAACAGCGACGAACACAAAGGAGGTGCAATAGAAACAAACACCTCCACGCGCCGCCCAAGAGGCCGTCCATCAGGTTCAAAAAACAAACCAAAACCACCGATATTCATAACAAGAGATAGCCCTAACGCGCTTCGAAGCCATGTCATGGAAGTAGCAACAGGAACTGATATATCAGATAGCATCGTTCAGTTTGCAAGGAAACGACAGAGAGGTATTTGCATTCTAAGCGCAAGTGGAACCGTAGTTAACGTTTCTCTCCGGCAACCTACAGGTCCCGGAGCTGTGGTGGCGCTTCCAGGGAGATTTGATATTCTATCTTTGACTGGTTCAGTGCTTCCTGGACCTTCACCGCCGGGAGCTACTGGTTTGACTATTTATCTTTCTGGAGGACAAGGACAGGTGGTTGGCGGTGGGGTGGTTGGCCCCCTTGTGGCGGCAGGACCGGTTATGTTGATGGCGGCGACATTTTCGAATGCGACGTATGAGAGGCTGCCTGTTGAGGATGGTGATGATCAAGAAGGGCATCAAGGTGGTGGTGGTGGTGGTGACGAGGAGTCTCCGACACGAGCCGCGGGGATGGGACAGTTAGCGATTGGATCTGTTGGAGAAGGTTCTTCAATTCCACCAGGTTATAACAATGTTGGTGGTAATTTGGGTGTTTCAAATGGAGGGCAACAACAATTGTTGAATAATCATGAAGCTTATAATTCTCCTTGGGGTCATGCTAGTCATGGTAGACCACCATACTAA 927 0.4919 MANRWWTGPVGLGGMDNSVTSSPLGKPDLGFSMNQSAVTGVNNMNNNNNNEEEEEDEKENSDEHKGGAIETNTSTRRPRGRPSGSKNKPKPPIFITRDSPNALRSHVMEVATGTDISDSIVQFARKRQRGICILSASGTVVNVSLRQPTGPGAVVALPGRFDILSLTGSVLPGPSPPGATGLTIYLSGGQGQVVGGGVVGPLVAAGPVMLMAATFSNATYERLPVEDGDDQEGHQGGGGGGDEESPTRAAGMGQLAIGSVGEGSSIPPGYNNVGGNLGVSNGGQQQLLNNHEAYNSPWGHASHGRPPY 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03247 308 MobiDBLite consensus disorder prediction 225 248 - -
Mepo4g03247 308 MobiDBLite consensus disorder prediction 1 100 - -
Mepo4g03247 308 Coils Coil 41 61 - -
Mepo4g03247 308 MobiDBLite consensus disorder prediction 14 48 - -
Mepo4g03247 308 Pfam Plants and Prokaryotes Conserved (PCC) domain 104 217 IPR005175 -
Mepo4g03247 308 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 44 300 IPR014476 GO:0003680
Mepo4g03247 308 CDD DUF296 104 187 IPR005175 -
Mepo4g03247 308 PIRSF ESCAROLA 23 308 IPR014476 GO:0003680
Mepo4g03247 308 SUPERFAMILY AF0104/ALDC/Ptd012-like 100 227 - -
Mepo4g03247 308 Gene3D - 103 232 - -
Mepo4g03247 308 ProSiteProfiles PPC domain profile profile. 100 235 IPR005175 -
Mepo4g03247 308 FunFam AT-hook motif nuclear-localized protein 103 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03247 Mepo-Chr4 41948537 41950110 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03247 1 308 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 51.572 2.02e-81 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03247 - - qsu:112038015 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03247 4 41948537 41950110 Mepo4g03247 4 41948537 41950110 ECH