Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03244 ATGGAAGACACCAACAACAACAATCAAGTGACCTCATTGTTCGAGCAACAGAGCACCGTTAACGTCACTCCTGAACTTAACGGAACAACCACTGATGGGTCCCACCACTCCGTTACTGAGAACAAGAAGAAGCGTGGTAGGCCCAGAAAGTACGAGTCTCCCGAGGAAGCTATCGCCGGACGAAAAGCTATCGCCGCTAGAAAAGCCGCCGCCGCCGCCGCAGCTGCTGCTAACGCTACCGCTACGACGTCGTTTTCGTCTCCTAACTTTAACAAACCTAAAAAGTTTCATTCCTCATCTCTAGGTAATTCAAGAGAGGGGTTCAATATCCACTTTGTTACTGTTGCTCCTGGTGAGGATATTGGCCAAAATATTATGATGCTCATGCAAAAAAATAGTAGGTGTGAGATGTGCATTCTGTCTGCATCTGGTTCCATCTCTAGCGCCACTCTTCGTCAGCCAGCAACCTCCGGAGGCAATATTACTTACGAGGGTCGCTTTGACATAATTTCACTTACTGGATCATATGTCCGCAATGAACTTGATGGTCGTTCTGGTGGTCTCAGTGTATGCTTATCCCATTCTGATGGGCAGCTTGTAGGTGGAAGCATTGCTGGACCCCTTAAGGCCGCTAGTCCAGTTCAGGTCATTGCTGGCACATTTTCTATTCCCTCCAAGGACCCCGGTGCTGGTATAAAAGGCGATGTTTCTACTAGCAAGTTACCATCGCCAGTTGGTGAATCAGCATCAAATATAGGTTTCCGCCCAGCAATTAACTCTTCCAATGGGAATGCAATCCCAGGAAACAAGGAACATCAAGTTATTGGGGGAAGTCATTTCATGCCTCAGCAATATGGTGTAAATGTGGTACCTTTCCATCCCTCGGATTGGGGAAGTCGTCCAGATTCAAGAAATGCTGGCTTTGAACTGATAGGAAGAACAGGTCACGGAGCAAACCACTCTCCTGAGAATGGAAACTATTCCTGA 987 0.4742 MEDTNNNNQVTSLFEQQSTVNVTPELNGTTTDGSHHSVTENKKKRGRPRKYESPEEAIAGRKAIAARKAAAAAAAAANATATTSFSSPNFNKPKKFHSSSLGNSREGFNIHFVTVAPGEDIGQNIMMLMQKNSRCEMCILSASGSISSATLRQPATSGGNITYEGRFDIISLTGSYVRNELDGRSGGLSVCLSHSDGQLVGGSIAGPLKAASPVQVIAGTFSIPSKDPGAGIKGDVSTSKLPSPVGESASNIGFRPAINSSNGNAIPGNKEHQVIGGSHFMPQQYGVNVVPFHPSDWGSRPDSRNAGFELIGRTGHGANHSPENGNYS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03244 328 MobiDBLite consensus disorder prediction 300 328 - -
Mepo4g03244 328 Pfam Plants and Prokaryotes Conserved (PCC) domain 110 221 IPR005175 -
Mepo4g03244 328 CDD DUF296 109 221 IPR005175 -
Mepo4g03244 328 SUPERFAMILY AF0104/ALDC/Ptd012-like 107 221 - -
Mepo4g03244 328 ProSiteProfiles PPC domain profile profile. 104 244 IPR005175 -
Mepo4g03244 328 Gene3D - 109 233 - -
Mepo4g03244 328 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 12 244 IPR039605 GO:0003680
Mepo4g03244 328 MobiDBLite consensus disorder prediction 1 35 - -
Mepo4g03244 328 MobiDBLite consensus disorder prediction 82 101 - -
Mepo4g03244 328 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03244 Mepo-Chr4 41922387 41928180 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03244 42 327 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 44.262 2.53e-62 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03244 - - gmx:100809675 342.813