Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03232 ATGAACTGCTTTCCGTGTTGCGGCCATCAGAAAAATAAAAACAGTAATAGTAAGAGAGAGCATGGTTCTCCCACATCACAGGAAATCACCCCTGCATCAAAAACACCAGATATGAAGAAACAAAGGGCAGATGAGCAAATGCAAGGAGATCCAACATACATCAACGCACAAAATTTCACTTTCCGTGAGCTAGCAACAGCAACAAAGAATTTCCGACAGGAATGTCTTCTTAGTGAAGGAGGCTTTGGAAGAGTCTATAAAGGGGTTATTCCTGCAACTGGACAGGTTGTAGCTGTGAAGCAACTCGATCGACATGGATCCGAAAACAGCAAGGAATTTCTGGCTGAAGTTTCTCTTCTGAGCCATGTTCACCATGAAAATCTTGTCAATCTCATTGGTTATTGTGCTGATGGTGATCAACGTCTTTTGGTATATGAATACTTTCCTGGCTCTACTCTTGAAGACCGTCTTCTTGAGAACAAAACGGATGAACCACCATTAAATTGGTTTGATAGAATGAAAGTAGCAGAAGCTGCATCTAAAGGACTGGAGTACTTGCATAACAGTGCCAATCCACCAATTATATACCGTGACTTTAAAGCATTCAACATCTTGTTGGATGTTGATCTTAATGCAAAACTATACGATTTCGGAATGGTCAAACTTTCTGGTGGAGACAAGATGAACCATGCACCTCCAAGAGTTATGGGTACATACGGTTATTGTGCTCCTGAATATACAAGAACAGGTCAATTCTCCTTGAAATCAGATGTATACAGTTTTGGAGTTGTCTTGCTTGAACTTATCACTGGACGACGTGCCATTGACACCTCAAAGCCTAACGAAGAGCAAAACCTTGTTTCATGGGCACAACCCTTATTCAGGGACCCAAAGAAATTTCCAGATATGGCAGATCCACTTCTCAACAAACAATTCCCAGAAAAGGATCTTAATCAAGCTGTTGCAATAGCAGCCATGTGCTTACAAGAGGAACCAGAAGCTCGTCCTTTGATCGGCGACGTTGTGACCGCTCTGAGTTTTCTTTCCACGGCAACGCAATCAATTCTACCACCCTCACTTCCCACGGCCACCTCTGTCTCTATGCATAGTGTTGCTACTGAAAGCGAATGGGAAAGTGAGAGTGAAAGTGAATTAGAAGGAGGAACTTCAGATGATGAAGGCCCTGATCATGAAGAAGACAATGAAACTTCCAAAAAGCATGTTGCATCTAGTGCAAAATACCAAGAAAATGATGTCTTAATCCAACATCAAAAAAGGGCGTCTTCAAAGAAATCAAGCCGAAAAAGCAGCACAAGATCAAGGAATGAAACAATGAGTACAGATTCAGCAGAGGGAAGTGCTTCTTCCAGTGACCAAAAAAGTAGAAAATGGCAAAGCTTTGTTGGTAATTTAAGCCAAAAGACAAACAGCACAAAAAAGGCTGTCATCAAAGAATTAAGCATGAAAAGTAGCAAAAAAACTTCAATCAAAGAACTAAGCCAGAAAAGCAGTAGAAAATCTTCCATCAGAAATTTAATCCATAAGAGCAGTGGAAAATCTTCTGCTAGAGTTTCGAGCCACACGGAATCGGAAGATGGAAGCATGATTTCGTCTCATAGAGCTGGCTCATCAATCCAATATACAAGCAGCGCTATGTCTGACCGTAGCAGCAGCAGAGGAAGCGGGAGTGTTCACTCGGACATTAACCATAGCAGAAGGACAGAAGAGAGCATGCGATTAGCCATGGAATCTGATGATGAAGGAAACAGTCATCCTTTCGATCGTATGAGTAGAAGTGAATCAGATCGGCGATGA 1815 0.4182 MNCFPCCGHQKNKNSNSKREHGSPTSQEITPASKTPDMKKQRADEQMQGDPTYINAQNFTFRELATATKNFRQECLLSEGGFGRVYKGVIPATGQVVAVKQLDRHGSENSKEFLAEVSLLSHVHHENLVNLIGYCADGDQRLLVYEYFPGSTLEDRLLENKTDEPPLNWFDRMKVAEAASKGLEYLHNSANPPIIYRDFKAFNILLDVDLNAKLYDFGMVKLSGGDKMNHAPPRVMGTYGYCAPEYTRTGQFSLKSDVYSFGVVLLELITGRRAIDTSKPNEEQNLVSWAQPLFRDPKKFPDMADPLLNKQFPEKDLNQAVAIAAMCLQEEPEARPLIGDVVTALSFLSTATQSILPPSLPTATSVSMHSVATESEWESESESELEGGTSDDEGPDHEEDNETSKKHVASSAKYQENDVLIQHQKRASSKKSSRKSSTRSRNETMSTDSAEGSASSSDQKSRKWQSFVGNLSQKTNSTKKAVIKELSMKSSKKTSIKELSQKSSRKSSIRNLIHKSSGKSSARVSSHTESEDGSMISSHRAGSSIQYTSSAMSDRSSSRGSGSVHSDINHSRRTEESMRLAMESDDEGNSHPFDRMSRSESDRR 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03232 604 FunFam probable serine/threonine-protein kinase RLCKVII 43 147 - -
Mepo4g03232 604 MobiDBLite consensus disorder prediction 356 604 - -
Mepo4g03232 604 MobiDBLite consensus disorder prediction 19 34 - -
Mepo4g03232 604 MobiDBLite consensus disorder prediction 439 484 - -
Mepo4g03232 604 MobiDBLite consensus disorder prediction 566 604 - -
Mepo4g03232 604 MobiDBLite consensus disorder prediction 11 48 - -
Mepo4g03232 604 FunFam Serine/threonine-protein kinase PBS1 148 361 - -
Mepo4g03232 604 MobiDBLite consensus disorder prediction 377 398 - -
Mepo4g03232 604 MobiDBLite consensus disorder prediction 485 504 - -
Mepo4g03232 604 Pfam Protein kinase domain 76 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g03232 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Mepo4g03232 604 SUPERFAMILY Protein kinase-like (PK-like) 57 379 IPR011009 -
Mepo4g03232 604 MobiDBLite consensus disorder prediction 356 374 - -
Mepo4g03232 604 Gene3D Phosphorylase Kinase; domain 1 40 147 - -
Mepo4g03232 604 Gene3D Transferase(Phosphotransferase) domain 1 149 356 - -
Mepo4g03232 604 MobiDBLite consensus disorder prediction 505 565 - -
Mepo4g03232 604 PANTHER OS07G0668900 PROTEIN 3 353 - -
Mepo4g03232 604 ProSiteProfiles Protein kinase domain profile. 71 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03232 Mepo-Chr4 41751939 41755383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03232 1 390 Glycoside Hydrolase AT3G07070 56.127 4.69e-154 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mepo4g03232 Pkinase 4.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03232 - - gmx:100804526 614.379