Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03212 ATGGAAGAAAACAACAACAACAACACCAACACCAACAACACCAATAACAACAACAACAATGAAAAACAAGTATTGAACACTGAAGTTGGTTGCTCTGCTAAACAGAGGAAGAGAAGAGATTTGATCGATTTAAATGAATCTCCTCCTTCTCCTGGTTATTCTCAGACTTCTGCTGATGATTGCCATGTGGCAACAAGAGGAGATGTAACACTCCAAGTTGAAACTGAAGTTCAACAACCAGTGTTGAATTTCTCATCCCCAACACCACCTGATCAAGGACATGGTGCAGAAGAAGAACAAGACCATGTGCAAAATGATGCAAATGTAGTGGTGAAAAATGCTGAAATTCTAAGGGCTAGGAAAGAGAAGATGCCAATGAACTTTTTTGAAGCAGTGCATACCAAAGAAGATAGTACAACTGATGATAAAGAAACAAATGTACCAACTGATGATCAAGTTTCAGATACACACGCGGATGATGAAGCAACTGCCATAGGAGGAATGATGTTGCTTCAATATGATGATGGTGGTGCTAGTGGATCTTGTCCACAAAGGAAGAGAAAGAGGGGCTTCTCTGAATACTATAAACCACCTTGCCTTGTGACAGATGTCGGGCAAAAAATAGTGATCCGAGTTGAAAGCGATGAAGACATTTTGGATGATGGTTATTGTTGGCGCAAGTACGGATGCAAAGAGATCAAAGGAAATCCTAATAATCCTAGGGGGTACTATAGATGCACAACACAAGGTTGTAACATTAAAAAACAAGTGGAAAGGGATGCTAAAGATCCAAAATATGTACTTGTTACATATGATGGAAAACATACCCACAGACCTGTCATTGATAAAAAAAGACCAACATACTCAAGAAATACTACAACAACTGGAGTCCGTAGAAATGCCAGCATGCCGCCACCACCACCACCACCATTTGCATTGCCTATGGTTCACCCTCTCCCTCCTTTTCACCAATATGGCTATATACCTTATGGTATGAATTACCGTTGGCCTAGTACCATGATGTGGACTTTATTAAACATGTCGGGCAATACCATGATGCAACCTTTCTTAAACATGGCGGGTAACACCATGATGCAACCTTACAGACCCATTAGTGAACAAAATTTTCTAGAACGTCGTGCTTCAACTCCTATTGATACAAATCAAGTTGGACCTAATATCAATGGGTCAGTTCCGCTTCATGTATTTCCGATATCACCACCATTACCACCATTTCCTATGACTACAACTCAAGTTGGACATAATATCAATGGGTCAGTTCCGCTTCCTGTATTTCCGATATCACCACCATTACCACCATTTCACATTGTACCATATGGTGGGGATTTCCTTCAGGTTGGTGGAAATGGTATTGTTGCTGCTCCAGTCTTTCCTTTCATGGGTACTTCACCAGCTGATCGGGAAGCTACAGATGTTCCTGACTCCGAATGA 1452 0.4105 MEENNNNNTNTNNTNNNNNNEKQVLNTEVGCSAKQRKRRDLIDLNESPPSPGYSQTSADDCHVATRGDVTLQVETEVQQPVLNFSSPTPPDQGHGAEEEQDHVQNDANVVVKNAEILRARKEKMPMNFFEAVHTKEDSTTDDKETNVPTDDQVSDTHADDEATAIGGMMLLQYDDGGASGSCPQRKRKRGFSEYYKPPCLVTDVGQKIVIRVESDEDILDDGYCWRKYGCKEIKGNPNNPRGYYRCTTQGCNIKKQVERDAKDPKYVLVTYDGKHTHRPVIDKKRPTYSRNTTTTGVRRNASMPPPPPPPFALPMVHPLPPFHQYGYIPYGMNYRWPSTMMWTLLNMSGNTMMQPFLNMAGNTMMQPYRPISEQNFLERRASTPIDTNQVGPNINGSVPLHVFPISPPLPPFPMTTTQVGHNINGSVPLPVFPISPPLPPFHIVPYGGDFLQVGGNGIVAAPVFPFMGTSPADREATDVPDSE 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03212 483 ProSiteProfiles WRKY domain profile. 214 277 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo4g03212 483 Gene3D WRKY domain 204 280 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo4g03212 483 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 9 286 IPR044810 GO:0003700
Mepo4g03212 483 MobiDBLite consensus disorder prediction 1 22 - -
Mepo4g03212 483 MobiDBLite consensus disorder prediction 286 300 - -
Mepo4g03212 483 MobiDBLite consensus disorder prediction 39 59 - -
Mepo4g03212 483 MobiDBLite consensus disorder prediction 286 305 - -
Mepo4g03212 483 Pfam WRKY DNA -binding domain 220 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo4g03212 483 SUPERFAMILY WRKY DNA-binding domain 213 278 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo4g03212 483 MobiDBLite consensus disorder prediction 79 103 - -
Mepo4g03212 483 SMART WRKY_cls 219 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo4g03212 483 MobiDBLite consensus disorder prediction 134 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03212 Mepo-Chr4 41497749 41500997 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03212 150 277 WRKY Transcription Factor Family AT2G38470 43.846 1.07e-24 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo4g03212 WRKY 5.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03212 - K18835 mtr:25484596 765.763