Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03168 ATGGCAACTAGAAGATATGCATTTGGAAGGATGGATGAGGCAAACCATCCAGATTCCATAAGAGCAACCGTAGCTGAATTTTTCTCAACTTGCATCTTTGTCTTTGCTGGAGAAGGCTCTGCCCTAGCTCTAAGGAAGCTATACAAGGATGCAGGTGCATCATCTGGTGAGCTAGTGGTACTTGCACTAGCTCATGCATTTTCACTATTTGCTGCTATATCTTCTAGCATGCATGTATCTGGTGGACATGTCAACCCTGCTGTAACTTTTGGTGCTCTTCTTGGTGGTAGAATTTCTGCTCTTAGAGCTGTCTACTATTGGGTTGCTCAACTTCTTGGTTCTTTGGTGGCTGCCCTCTTACTGAGGCTTGTCACTAATAACATGAGACCACAGGCGTTCAACGTGGCATTTGGTGTTGGTGCTGGGAACGCTCTTGTACTTGAGATTGCCATGACATTTGGTTTAATGTATGTTGTGTATGCAACTGCCATTGATCCCAAAAGAGGCACCATTGGCACAATTGCACCCTTAGCAATTGCACTTGTTGTTGGAGCAAACATCCTAGCTGGTGGACCATTTGATGGAGCATGCATGAACCCTGCTCGGGCTTTTGGGCCTTCTTTAGTGGGCTGGAGATGGGATTATCATTGGATCTTCTGGGTGGGTCCATTTCTTGGAGCTGCAATAGCAGCACTTTTATATGAATATATTATGGTTCCAGTTGAGCCTCCTCATACTAATCCTCATCATCAACCTTTGGCTCCTGAAGATTATTAG 777 0.4492 MATRRYAFGRMDEANHPDSIRATVAEFFSTCIFVFAGEGSALALRKLYKDAGASSGELVVLALAHAFSLFAAISSSMHVSGGHVNPAVTFGALLGGRISALRAVYYWVAQLLGSLVAALLLRLVTNNMRPQAFNVAFGVGAGNALVLEIAMTFGLMYVVYATAIDPKRGTIGTIAPLAIALVVGANILAGGPFDGACMNPARAFGPSLVGWRWDYHWIFWVGPFLGAAIAALLYEYIMVPVEPPHTNPHHQPLAPEDY 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03168 258 NCBIfam MIP family channel protein 25 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo4g03168 258 FunFam Probable aquaporin TIP1-1 4 251 - -
Mepo4g03168 258 PANTHER AQUAPORIN-8 6 242 IPR034294 -
Mepo4g03168 258 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo4g03168 258 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Mepo4g03168 258 Pfam Major intrinsic protein 14 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo4g03168 258 Gene3D Glycerol uptake facilitator protein. 4 243 IPR023271 -
Mepo4g03168 258 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo4g03168 258 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo4g03168 258 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo4g03168 258 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo4g03168 258 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo4g03168 258 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo4g03168 258 SUPERFAMILY Aquaporin-like 13 247 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03168 Mepo-Chr4 40999111 41002124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03168 2 258 Major Intrinsic Protein MIP AT1G73190 68.182 4.10e-122 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03168 K09873 - gmx:100814469 422.935