Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03146 ATGAAGTTGGATCCCCCGGCCGCTGCCGAACGTTGCGACTCGCCGCCGCCGTTCCCGGCGGTCCTCTCCCATTGCCCTTGCCCTTGCCCCTCTGCCTCTCTGTTTCAGACTGAGCTTGTACTGATTAAGAATAGGCTTCAATATGAGAATTCTTGTGAAATTGGAGCCTTCTCAAAACTTACCAATGCGTATTGTTTGACTGCTATTGGAGGTTCTGCAAATTTCTACAGTGCATTTGAGGCTGAACTAGCAGATATTATTCCTGTGGTCAAAACATCCATTGGCAGCACTCGCCTTGTTGGTCTTCTTTCTGTTGGAAACAAGAATGGGCTTTTGTTGCCCCATACCACCACAGACCAAGAGCTTCAACATTTGAGAAACAGTCTACCTGATCATGTTGTTGTTCAGCGTATAGAAGAAAAATTGTCTGCTCTGGGAAATTGTATAGCATGCAATGATCATGTTGCCCTTGCACACACTGATCTCGACAAGGAAACTGAGGAGATGATTGCTGATGTTCTTGGAGTTGAAGTTTTCAGGCAGACAGTTGGTGGTAATATTCTTTCTGGCAGTTACTGTGCTCTGTCCAACAGAGGTGGTTTGGTCCACCCTCATACTTCTGTTGAAGACTTGGAGGAACTCTCTACACTTCTTCAAATTCCGTTGGTTGCTGGGACTGTCAATCGCGGTAGTGAAGCAATAGCTGCTGGCATGGTAGTAAATGATTGGACAGCATTTTGTGGCTCGGACACTACAGCAACAGAGCTCTCTGTGATCGACACTGTTTTCAAGCTGAGGGAGGCTCCGTATTGA 813 0.4674 MKLDPPAAAERCDSPPPFPAVLSHCPCPCPSASLFQTELVLIKNRLQYENSCEIGAFSKLTNAYCLTAIGGSANFYSAFEAELADIIPVVKTSIGSTRLVGLLSVGNKNGLLLPHTTTDQELQHLRNSLPDHVVVQRIEEKLSALGNCIACNDHVALAHTDLDKETEEMIADVLGVEVFRQTVGGNILSGSYCALSNRGGLVHPHTSVEDLEELSTLLQIPLVAGTVNRGSEAIAAGMVVNDWTAFCGSDTTATELSVIDTVFKLREAPY 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03146 270 Pfam eIF-6 family 45 244 IPR002769 GO:0042256|GO:0043022
Mepo4g03146 270 SMART eIF6neu2 44 245 IPR002769 GO:0042256|GO:0043022
Mepo4g03146 270 Hamap Translation initiation factor 6 [eif6]. 31 270 IPR002769 GO:0042256|GO:0043022
Mepo4g03146 270 FunFam Eukaryotic translation initiation factor 6 42 266 - -
Mepo4g03146 270 CDD IF6 45 264 IPR002769 GO:0042256|GO:0043022
Mepo4g03146 270 Gene3D - 42 266 - -
Mepo4g03146 270 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 44 268 IPR002769 GO:0042256|GO:0043022
Mepo4g03146 270 PIRSF Transl_init_IF-6 42 267 IPR002769 GO:0042256|GO:0043022
Mepo4g03146 270 SUPERFAMILY Pentein 44 265 - -
Mepo4g03146 270 NCBIfam translation initiation factor IF-6 45 264 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03146 Mepo-Chr4 40768608 40771889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03146 42 268 Eukaryotic Initiation Factors Gene Family AT3G55620 84.581 4.48e-148 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03146 K03264 - gmx:100777602 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g00974 7 15068566 15072911 Mepo4g03146 4 40768608 40771889 PCT