Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03140 ATGGAGAAAAAGATAGTAGTGAAATATAAAGAGTGTCTCAAGAACCATGCAGCTACAATTGGTGGCAATGCAATTGATGGATGTGGTGAGTTCATGCCAAGTGGAGAAAATGACACACTTGAAGCTCTCAAATGTTGTGCTTGCAATTGTCACAGAAACTTCCACAAAAAAGAAATAGAGTCTGATTTTCAACATTATGCTAATCTTTCACTGATTCCTGATCATAACATTAATGCACCTTTCTTGGCTCATTTATCTCCCAACAACAAAAGTGGATCAACTAGTCCTTCTGGTCAGTCTTATTATGAGAAAGATTGTATTAAGGATGTGGAAAATCGAACCGAAAAGATGATAATTAAGAAGAGGTCTAGAACTAAGTTCAGTAAAGAACAGAAGGAGAAGATGTTATGCTTTGCAGAAAAGGCAGAGTGGAGGATACAGAAGCTAGATGAATCTGTGGTGCAGAAGTTTTGTCAAGAGATTGGAATCAAGAGAAGAATCCTCAAAGTGTGGATGCATAATAACAAGAACACTTTTGCCAAGAGAAATCTTTCTACAAGCTAG 564 0.3706 MEKKIVVKYKECLKNHAATIGGNAIDGCGEFMPSGENDTLEALKCCACNCHRNFHKKEIESDFQHYANLSLIPDHNINAPFLAHLSPNNKSGSTSPSGQSYYEKDCIKDVENRTEKMIIKKRSRTKFSKEQKEKMLCFAEKAEWRIQKLDESVVQKFCQEIGIKRRILKVWMHNNKNTFAKRNLSTS 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03140 187 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 9 58 IPR006456 -
Mepo4g03140 187 Pfam ZF-HD protein dimerisation region 7 59 IPR006456 -
Mepo4g03140 187 SUPERFAMILY Homeodomain-like 117 181 IPR009057 -
Mepo4g03140 187 FunFam Zinc-finger homeodomain protein 2 108 181 - -
Mepo4g03140 187 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 8 59 IPR006456 -
Mepo4g03140 187 Gene3D - 106 181 - -
Mepo4g03140 187 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 4 178 - -
Mepo4g03140 187 NCBIfam homeobox domain, ZF-HD class 120 177 IPR006455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03140 Mepo-Chr4 40721010 40721691 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03140 3 183 ZF-HD Transcription Factor Family AT1G14440 48.990 9.61e-61 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mepo4g03140 ZF-HD_dimer 2.9e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03140 - - gmx:100793926 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03140 4 40721010 40721691 Mepo4g03140 4 40721010 40721691 ECH