Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03123 ATGGAAGAAAGAGAGAATTTTGGTGCTGTGAATGTAGTGGGTGGTAATGAGGTTCCTGTGAGTTTTCAAGCTGCTCCAAGGATTGATAACAACTTGGATTTTTCCATGGCAACGGTGCCGGTGTCGTTGCCGGAGACAGCGTTGAAGAAGAAGAGGGGGAGACCAAGGAAGTATGGGCCAGATGGCAAGCCTGCTCCTGGAGCTGTGACTGCGCTTTCGCCTATGCCGATTTCATCGTCGATTCCGTTGACTGGAGAGTTCTCTGCTTGGAAAAGGGGTAGAGGGAAGCCTGTTGAATCTATGAAGAAATCATCTTTTAAGTTTGATTTTGAAACTCCACCTGTGCAAGTTGTAGGTGGAGGTGTAAGTGAGGGAATTGCATACTCAGTAGGTGCCAACTTCACAGCTTATGTGCTTACAGTGAATTCTGGCGAGGATGTTACCATGAAAATTATGTCCTCCCAACAAGGATCACGTGCAATATGCATTCTCTCTGCCACTGGCACAATTTCAAATGTTACACTCCGTCAATCGACTTCTTCAGGGGGTACTTTAACATATGAGGGGCGGTTTGAGATTCTTTCCTTATCTGGTTCCTTTATGCCAACTGAGAATGGAATTACAAGAAGCAGATCTGGTGGGATGAGTGTCTCTTTGGCAGGCCCAGATGGTCGAGTATTGGGTGGTGGACTCGCTGGTTTGCTTATAGCTTCTGGTCCCGTGCAGGTTGTTGTGGGAAGTTTTCTTCCTGGTCACCATCTGGAGCACAACAGCAAGAAGCAGAGGGTGGAGCATAATATATCAACTATTACACATAATAATCCTCCTCCACATGTTAATCATCATGTGTCTAATGAAGTAAGTTTTGGTGGAGTGAAGCCATTTATGACACCTGCTGCATTTCAAGAAGAGAATATTGTTTCTTTCAACAACAATGCTCAAGACTCTAGGAACACCTCATCTGCTGAAGACAGAGATCCTTTACCTGAAAAGGACTCTAATCACAGTCAATCAACTACTTGA 1023 0.4497 MEERENFGAVNVVGGNEVPVSFQAAPRIDNNLDFSMATVPVSLPETALKKKRGRPRKYGPDGKPAPGAVTALSPMPISSSIPLTGEFSAWKRGRGKPVESMKKSSFKFDFETPPVQVVGGGVSEGIAYSVGANFTAYVLTVNSGEDVTMKIMSSQQGSRAICILSATGTISNVTLRQSTSSGGTLTYEGRFEILSLSGSFMPTENGITRSRSGGMSVSLAGPDGRVLGGGLAGLLIASGPVQVVVGSFLPGHHLEHNSKKQRVEHNISTITHNNPPPHVNHHVSNEVSFGGVKPFMTPAAFQEENIVSFNNNAQDSRNTSSAEDRDPLPEKDSNHSQSTT 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03123 340 ProSiteProfiles PPC domain profile profile. 131 273 IPR005175 -
Mepo4g03123 340 Pfam Plants and Prokaryotes Conserved (PCC) domain 136 248 IPR005175 -
Mepo4g03123 340 MobiDBLite consensus disorder prediction 49 68 - -
Mepo4g03123 340 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 33 325 IPR039605 GO:0003680
Mepo4g03123 340 CDD DUF296 137 248 IPR005175 -
Mepo4g03123 340 Gene3D - 135 268 - -
Mepo4g03123 340 SUPERFAMILY AF0104/ALDC/Ptd012-like 133 252 - -
Mepo4g03123 340 MobiDBLite consensus disorder prediction 308 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03123 Mepo-Chr4 40598758 40603565 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03123 48 253 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 68.421 1.05e-84 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03123 - - gmx:100789179 449.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03123 4 40598758 40603565 Mepo4g03123 4 40598758 40603565 ECH