Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03116 ATGAAGACTCCGAGCAAGAAAAACAAAAGAACTGAAGACGACGAGGGTGAAACCAATGGAGGTGATCCATATATGTCCGAAAGCAATGTAGCTGATCTGCCTTTGATCAAAAGCAATAAAAGTGAAGATGGCGAGCAAGGCAAAAAGAAAAAGAAAAAGAAGAAGAAACTGGGTGAAGAAAGCAATCATAAGAAGTATAATGAGTTCAAAAGCAATGAATGTGAAGATGATGACCACGGAAAGAAGATGAAAAAGAAGCGGAAGCTAGTTGAAGGAAACACACTTGAGGAGGGCAACAACTTTAGAAGCAATGAAGGTGATAATGGCGAGCAGGGAAAGAAGAAAAAGAAAAAGGAAAAATTGAGTGAGGAAAGCAAACATAAGGAGTATAACGAGTTCAAAAGTAACGAATGTGAAGCTGACGACCAAGGAAAGAAGATGAAAAAGAAGCTAATTGACGGAAGCACATTGAAGGAATGTAATGACTTTAGAAGCAATGATGATGAAGATGGTGAGCGAGAGAAAAAGATGAAGAAAAAGAAGAAACCAAGTGAAGAAGGCACACATAAGGAGTATAGTGAGTTCAAAAGCAATGATTGTGAAGATGACCAAGAAAAAAAGACGAAAAAGAAGCAGAAACTAATTGAAGGAAACACACTTAATGAGTGTAATGACTTTAGAAGCAATGGAGGTGAAGAGGGTGAGCAAGACAAGAAGATGAAGAAAAAGAAGAAGAAACTAAGTGAAGAAAGTAAACATAAGGAGTATAGCAAGTTTGAACCAAATGAATGTGAAGATGATGATGGCCAAGGAAAGAAAATGAAGAAGAAGAAACTAATTGAGGAAGCCAAACTTAAGGAGTATAGTGACATTATAAGCAATGAAGGTGATGCTGATACTTGTTTCTCTGTCACTGAAGTTAATGATCAAGGCAAAAAGATGAAGAAAAAAAAGAAAGCAAAGACAGTTACAAGCGAGTCTCCTAACTGTGCACGTAATGAAACTCCCAGCAATGAAGGTGATGCTGATGCTTGTTTCTCCGTCACTGAAGTTAATGATCAAGGCAAAAAGATGAAGAAAAAAAAGAAAGCAAAGATAGTAACAAGCGAGTCTCCTAACCGTGCACATAATGAAACTCCTAACTCTGCACATAATGGAACATCTAAACGCAAACAAGTAACTTGGGCTGATGAGGTGGAGGAGAAGTTATGTTGTGACGGCTTATTGCGTGGGAAAAGGTATACACCCGAAGAAGATGAGAAGATCAAAGCAGCTGTTTCGGAGTATATAGATTCTCATGGTTTGGGAGACGAAGGTCTTGATATGGTTCTAAATGTCAAATTACACCCCGAGGTTAGAGGCTGTTGGAAAGAAATCGCAAAAAGCATACCTGAGAGGCCTCATATGAGTGTGTATCAACGCGCTCATGCTTTGTTAGAAAGGGAGGGGAGGTGTAAGTGGACACATGAAGAGCTGGAATTTATTGAAAAGACCTACGAGCAACATGGAGCTAGTTGGAGGGCTGTAGCCGACGCTTTGGGTAAAAGTCGAGATCAGGTAAAAGATGCGTGGCGCCGATTAAAATATACCAAAACAAAAAAAGGACATTGGTCCCAAGAGGAGTATCAAAATTTATTTAACTTAGTAAACCTAGATCTGCTCGAGAGGGCTAAAGAGCCTTATAAAAAATCACAACATGGTATGTTGCGAGATAATATTTGTTGGGAGGCAATTGGTCACAAATTGGAGACCCGAAACAGTGCATTTTGCTGCAAGAAGTGGTACGAGCAATTAACATCAACAATGGTTGCTAGTGGTGATTGGTGTGATACCGATGACTTCCGCTTGATAAACGCTTTATATGCTTTGGATGCTTGCTGCATGGAGGAGGTAGACTGGGACAATCTACTTGAGCATAGGTCTGGTGATGTGTGCAGGAAACGATGGGAACAAATGATCCACCATATTGGGGAGCATGCAGCCAAGTCATTCATTGAGCAGGTTGAAGTTCTGGCAAAGAGATTCTGCCCTAACCTGTTGAAAGATAGAGAGGCCTTTGACAACAAACCTGTGATTTGTTGA 2082 0.4006 MKTPSKKNKRTEDDEGETNGGDPYMSESNVADLPLIKSNKSEDGEQGKKKKKKKKKLGEESNHKKYNEFKSNECEDDDHGKKMKKKRKLVEGNTLEEGNNFRSNEGDNGEQGKKKKKKEKLSEESKHKEYNEFKSNECEADDQGKKMKKKLIDGSTLKECNDFRSNDDEDGEREKKMKKKKKPSEEGTHKEYSEFKSNDCEDDQEKKTKKKQKLIEGNTLNECNDFRSNGGEEGEQDKKMKKKKKKLSEESKHKEYSKFEPNECEDDDGQGKKMKKKKLIEEAKLKEYSDIISNEGDADTCFSVTEVNDQGKKMKKKKKAKTVTSESPNCARNETPSNEGDADACFSVTEVNDQGKKMKKKKKAKIVTSESPNRAHNETPNSAHNGTSKRKQVTWADEVEEKLCCDGLLRGKRYTPEEDEKIKAAVSEYIDSHGLGDEGLDMVLNVKLHPEVRGCWKEIAKSIPERPHMSVYQRAHALLEREGRCKWTHEELEFIEKTYEQHGASWRAVADALGKSRDQVKDAWRRLKYTKTKKGHWSQEEYQNLFNLVNLDLLERAKEPYKKSQHGMLRDNICWEAIGHKLETRNSAFCCKKWYEQLTSTMVASGDWCDTDDFRLINALYALDACCMEEVDWDNLLEHRSGDVCRKRWEQMIHHIGEHAAKSFIEQVEVLAKRFCPNLLKDREAFDNKPVIC 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03116 693 PANTHER GB|AAC33480.1 4 692 - -
Mepo4g03116 693 ProSiteProfiles Myb-like domain profile. 529 598 IPR001005 -
Mepo4g03116 693 CDD SANT 486 528 IPR001005 -
Mepo4g03116 693 MobiDBLite consensus disorder prediction 1 276 - -
Mepo4g03116 693 ProSiteProfiles Myb-like domain profile. 479 528 IPR001005 -
Mepo4g03116 693 MobiDBLite consensus disorder prediction 357 394 - -
Mepo4g03116 693 MobiDBLite consensus disorder prediction 1 17 - -
Mepo4g03116 693 ProSiteProfiles Myb-like domain profile. 600 653 IPR001005 -
Mepo4g03116 693 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 484 532 IPR017930 -
Mepo4g03116 693 MobiDBLite consensus disorder prediction 60 93 - -
Mepo4g03116 693 MobiDBLite consensus disorder prediction 370 390 - -
Mepo4g03116 693 MobiDBLite consensus disorder prediction 308 339 - -
Mepo4g03116 693 Pfam Myb-like DNA-binding domain 487 545 - -
Mepo4g03116 693 MobiDBLite consensus disorder prediction 228 276 - -
Mepo4g03116 693 Gene3D - 528 603 - -
Mepo4g03116 693 SMART sant 483 530 IPR001005 -
Mepo4g03116 693 SMART sant 533 600 IPR001005 -
Mepo4g03116 693 SMART sant 410 481 IPR001005 -
Mepo4g03116 693 Gene3D - 488 527 - -
Mepo4g03116 693 MobiDBLite consensus disorder prediction 107 216 - -
Mepo4g03116 693 SUPERFAMILY Homeodomain-like 459 541 IPR009057 -
Mepo4g03116 693 Gene3D - 411 486 - -
Mepo4g03116 693 MobiDBLite consensus disorder prediction 324 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03116 Mepo-Chr4 40524366 40527501 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03116 414 547 MYB Transcription Factor Family AT3G09370 29.710 2.34e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo4g03116 Myb_DNA-bind_6 2.1e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03116 - - mtr:112416380 1148.27