Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03106 ATGGAACCGCCATTTCAACAACCAACCCCCCGCCCTCCCACCATTCTCGGAAAATATCAACTCACCCGCCTCCTCGGCCGCGGCAGCTTCGCCAAAGTCTACAAAGCTCATTCCCTCCTCGACAATGCCACCACCGTCGCCGTCAAAATCATCGACAAGTCAAAAACCGTTGACGCCGCCATGGAGCCTCGTATAATCCGCGAAATCGACGCCATGCGCCGTCTTCATCACCACCCTAACATCCTCAAAATCCACGAAGTTATGGCTACAAAAACCAAAATCCATCTTGTCGTTGAATTCGCCGCCGGTGGTGAGCTTTTCTCTGCTCTCTCCCGCCGTGGAAGATTCTCCGAATCCACAGCTCGTTTCTATTTTCAACAGCTTGTCTCTGCGCTACGTTTCTGCCACCGTAACGGTGTTGCTCACCGTGATCTCAAGCCGCAGAATCTTCTCCTCGACGCCGATGGGAATCTAAAGGTTTCCGATTTCGGTCTCTCTGCTCTTCCCGAACATCTCAAAGACGGACTACTCCATACTGCTTGTGGTACTCCGGCGTATACAGCGCCGGAGATTCTCCGGCGTAATGGCGGTTATGACGGATCGAAAGCTGATGCGTGGTCGTGTGGACTTATACTCTACGTACTTCTCGCCGGTTATCTTCCGTTTGACGATTTGAATATTCCGGCGATGTGTAAGAAAATTTCCCGGCGTGATTACCGGTTTCCGGATTGGGTTTCGAAACGGGCACGTATTGTGATATATAGGTTACTTGACCCGAACCCGGAAACGCGAATGAATTTGGAAGGTTTATTTAGCAACGAGTGGTTTAAGAAATCGTTGAAACCCGAACTTGAACCGGAAAAGAGTGTATTCGGGTGTGATTATGGAAAGGAAGGGAAAGTTTTAGGGTTGAATGCGTTTCATATAATATCTATGTCTTCGGGTTTGGATTTGAGTGGTTTATTTGAAACGACGTCGTCATCTCAAGGTGGTAATAATAATAATACATGGAGGGAGAAGAGGTTTACTTCTAGTGCAAAGATTGAGGTGGTGGAAGAAAAGGTGAAGGAAGTTGGAGGGGTTTTGGGGTTTAAAGTTGAGGTTGGGAAGAATAGTGCAATTGGATTGGTGAAAGGGAAGGTGGCTTTGGTGGTTGAAGTTTTTGAGATTGTGCCTTGTCAACTTGTTTTGGTGGCTGTTAAGGTGGTAGAGGGTGGTTTGGAGTTTGAGGATAATCATTGGGAGGATTGGAAAGTTGGTTTGCAAGATCTTGTGATTTCATGGCACAATGAAGAGCCTTCATGA 1305 0.4751 MEPPFQQPTPRPPTILGKYQLTRLLGRGSFAKVYKAHSLLDNATTVAVKIIDKSKTVDAAMEPRIIREIDAMRRLHHHPNILKIHEVMATKTKIHLVVEFAAGGELFSALSRRGRFSESTARFYFQQLVSALRFCHRNGVAHRDLKPQNLLLDADGNLKVSDFGLSALPEHLKDGLLHTACGTPAYTAPEILRRNGGYDGSKADAWSCGLILYVLLAGYLPFDDLNIPAMCKKISRRDYRFPDWVSKRARIVIYRLLDPNPETRMNLEGLFSNEWFKKSLKPELEPEKSVFGCDYGKEGKVLGLNAFHIISMSSGLDLSGLFETTSSSQGGNNNNTWREKRFTSSAKIEVVEEKVKEVGGVLGFKVEVGKNSAIGLVKGKVALVVEVFEIVPCQLVLVAVKVVEGGLEFEDNHWEDWKVGLQDLVISWHNEEPS 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03106 434 SMART serkin_6 19 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g03106 434 CDD CIPK_C 305 422 - -
Mepo4g03106 434 FunFam Non-specific serine/threonine protein kinase 12 105 - -
Mepo4g03106 434 ProSiteProfiles Protein kinase domain profile. 19 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g03106 434 Pfam NAF domain 304 367 IPR004041 GO:0007165
Mepo4g03106 434 SUPERFAMILY Protein kinase-like (PK-like) 15 289 IPR011009 -
Mepo4g03106 434 Gene3D Kinase associated domain 1, KA1 301 426 - -
Mepo4g03106 434 FunFam Non-specific serine/threonine protein kinase 9 300 - -
Mepo4g03106 434 Pfam Protein kinase domain 19 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g03106 434 Gene3D Transferase(Phosphotransferase) domain 1 12 299 - -
Mepo4g03106 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Mepo4g03106 434 ProSitePatterns Protein kinases ATP-binding region signature. 25 49 IPR017441 GO:0005524
Mepo4g03106 434 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 14 400 - -
Mepo4g03106 434 ProSiteProfiles NAF domain profile. 299 323 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03106 Mepo-Chr4 40378669 40380500 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03106 8 431 Miscellaneous Gene Families AT3G23000 57.309 1.02e-164 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mepo4g03106 Pkinase 1.7e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03106 K12761 - gmx:100784173 618.231