Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03101 ATGGAAAACAGTGTTGCATATGAGAATGATCTCAACATGAAGGCTACTGAGCTAAGGTTAGGACTTCCAGGGACAGAACAAAATGAAGAACAAAAAGCACTTCCTGCAAAAATTTCCAACAAAAGACCATTGACTGAAACTTCAAAGGATAGTGGTTCAAAAACTTCTGATGATGCAGCACCTCCTTCAAAGGCTAAGATAGTGGGGTGGCCACCAATAAGATCTTACAGGAAGAACAGTTTGCAAGAGGCTGAGGCTTCTGGGATTTATGTGAAAGTGAGTTTGGATGGAGCTCCTTATCTTAGGAAAATTGATTTGAGGGTCTATGGAGGCTATGCACAACTTCTCAAAGCTTTGGAAAGCATGTTCAAGTTAACCATAGGTGATTATTCTGAAAAAGAAGGTTATAAAGGATCTGAATATGAACCTACATATGAAGACAAAGATGGTGATTGGATGTTAGTTGGAGATGTTCCTTGGGACATGTTTGTGACTTCTTGTAAAAGACTAAGAATCATGAAAGGATCAGAAGCTAGAGGTGTTTGA 546 0.3919 MENSVAYENDLNMKATELRLGLPGTEQNEEQKALPAKISNKRPLTETSKDSGSKTSDDAAPPSKAKIVGWPPIRSYRKNSLQEAEASGIYVKVSLDGAPYLRKIDLRVYGGYAQLLKALESMFKLTIGDYSEKEGYKGSEYEPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGSEARGV 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03101 181 MobiDBLite consensus disorder prediction 16 65 - -
Mepo4g03101 181 ProSiteProfiles PB1 domain profile. 88 175 IPR000270 GO:0005515
Mepo4g03101 181 Gene3D - 82 181 - -
Mepo4g03101 181 Pfam AUX/IAA family 47 180 IPR033389 -
Mepo4g03101 181 SUPERFAMILY CAD & PB1 domains 79 174 - -
Mepo4g03101 181 FunFam Auxin-responsive protein 83 181 - -
Mepo4g03101 181 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 178 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03101 Mepo-Chr4 40306336 40307860 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03101 91 179 B3 DNA Binding Superfamily AT4G23980 32.584 5.31e-10 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mepo4g03101 AUX_IAA 4.8e-51 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03101 K14484 - rcu:8280180 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03101 4 40306336 40307860 Mepo4g03101 4 40306336 40307860 ECH