Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03100 ATGGCCACTATGGGGCATGGTTTGAACCTGAAGGAAACTGAGCTTTGTCTTGGTCTGCCTGGTGGTGGTGGCGGCGGCGGCGGAGGTGGCTCTGAGGTGGAAACTCCAAGGGCTTCTGCAAAGAGAGGTTTCTCTGAGACAGTTGATCTGAAGCTTAATCTTCAAACCAAGGAAGATCTGAATGAGAAGAGTGCTTCAAAGGAGAAGACCCTCCTTAAGGACCCTGCTAAGCCACCAGCTAAGGCTCAAGTAGTTGGTTGGCCACCAGTGAGGTCATACAGGAAGAACATGATGGCACAAAAGGTTAACAATACTGAGGACACTGAGAAGACAACAAGTAACACTACTGCTGCTGCATTTGTTAAGGTTTCCATGGATGGAGCACCTTACCTTCGTAAGGTTGATTTGACAATGTACAAAACCTACAAAGATTTATCTGATGCCTTAGCCAAAATGTTCAGCTCCTTCACCACTGGTAACTATGGGGCCCAAGGAATGATAGACTTCATGAATGAGAGCAAGTTGATGGATCTTCTTAACAGCTCTGAGTATGTGCCAACCTATGAAGATAAGGATGGCGACTGGATGCTCGTGGGAGATGTCCCATGGGAGATGTTTGTTGGTTCATGCAAGCGTCTTCGCATAATGAAAGGATCAGAAGCTATTGGGCTTGCACCAAGAGCAATGGAGAAATGCAAAAACCGAAGCTGA 711 0.4684 MATMGHGLNLKETELCLGLPGGGGGGGGGGSEVETPRASAKRGFSETVDLKLNLQTKEDLNEKSASKEKTLLKDPAKPPAKAQVVGWPPVRSYRKNMMAQKVNNTEDTEKTTSNTTAAAFVKVSMDGAPYLRKVDLTMYKTYKDLSDALAKMFSSFTTGNYGAQGMIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGLAPRAMEKCKNRS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03100 236 Gene3D - 112 230 - -
Mepo4g03100 236 ProSiteProfiles PB1 domain profile. 118 218 IPR000270 GO:0005515
Mepo4g03100 236 MobiDBLite consensus disorder prediction 52 75 - -
Mepo4g03100 236 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 7 223 IPR003311 GO:0005634|GO:0006355
Mepo4g03100 236 Pfam AUX/IAA family 37 227 IPR033389 -
Mepo4g03100 236 SUPERFAMILY CAD & PB1 domains 113 217 - -
Mepo4g03100 236 MobiDBLite consensus disorder prediction 20 84 - -
Mepo4g03100 236 FunFam Auxin-responsive protein 113 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03100 Mepo-Chr4 40267614 40270722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03100 116 221 B3 DNA Binding Superfamily AT3G61830 32.075 1.08e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mepo4g03100 AUX_IAA 7.8e-84 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03100 K14484 - gmx:547949 381.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03100 4 40267614 40270722 Mepo4g03100 4 40267614 40270722 ECH