Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03096 ATGGCCGTGGCGGTTGTTGGTGAAGCTTTTCTGTCTGCTTTCCTTGAAGTTGTCCTCGACAGGCTTGCTTCTCCTGAGCTTGTTGACTTGATACGTGGGAAGAAAGTTGACATCAATTTGATCCAAAGGTTGAAGAACACTCTTTATGCTGTTGAAGCTGTGTTGAACGATGCTGAACAGAAACAGTTCAAAGACTCTGCTGTTAACAAATGGCTTGATGATCTCAAAGATGTTGTTTATGTTGCTAATGATCTTTTGGATCACCTCTCTACCAACGTTGCTACTACTTGGAAGAACAAAGAGGTGAGTACTGCTAACAACTTCATTCACTTTTTCAACTTTGAAGAAAGGGATATGGTTCGTAAGTTGGAAGACATGGCTGCTAGACTTGAATACATTCTCAAATTCAAAGATATTATTGGTCTTCAACATATTGCAACTCACCACTCTTCTTGGAGGACTCCATCAACCTCTCTAGATGTTGGGTCTAACATATCTGGTAGGGATCAAGACAAAGAGGCCATACTCAAATTACTGTTAGATGATGATCATGATAAGACTTGTGTGATCCCCATAGTTGGCATGGGTGGGCTTGGAAAAACCACTTTAGCCCAATCTTTGTACAATCATGACATTATAAAGCAGACATTTGATGTTCGAGCATGGATTTGTGTTTCTGATCATTTCGATGTTTTGAAGGTTACAAAGAACATTGCGGAGGAAATGGGAAGTGCATGTAACACAAATAACTTGAACATCCTTCATCAAGATTTGAAAGAGAAGCTGACAGGAAAAAAGTTCATAATTGTTCTAGGTGATGTCTGGATTGAGGATTATGATGGTTGGAATTCTCTTATAAGGCCTTTTCAATACGGAGCTAAGGGAAGTAAAATTCGTGTAACAACCCGTATTGAAAATGTTGCTACTATGGTCCAATCATTTCAACCTTACCATCTTAAGAAATTGACAGATGATGATTGTTGGTTAGTGTTTGCAAACCATGCATGTCTTTCTCCAGAAAAATCCACTGAGCAAATGGATATCCACAAATATGGCAAACAGATTGTGAAGAAATGCAAGGGATTGCCTTTAGCAGCACAATCACTCGGGGGCTTGTTGCGAGGTAAACGTGACATCAAGGATTGGAATAATATACTAAATGATAACATCTGGGAAAATGAGAGTAAGATCATTCCGACACTTAGAATTAGTTATCATTATCTCCCTCCCTATTTGAAGCGGTGCTTTGTTTATTGTTCATTGTATCCTAAGGATTACGAATTCGATAAGGACGATTTGATCTTGTTATGGATGGCCGAAGATCTTTTACAACCTCCGAAAAATGGAAAGACTTTAGAAGAAGTTGGTTATGGTTATTTTAATGACTTAGCTTCAAGATCATTTTTTAATTATTCTCCGAATGGGAAGGAGTTTCGTGATGCATGA 1446 0.3852 MAVAVVGEAFLSAFLEVVLDRLASPELVDLIRGKKVDINLIQRLKNTLYAVEAVLNDAEQKQFKDSAVNKWLDDLKDVVYVANDLLDHLSTNVATTWKNKEVSTANNFIHFFNFEERDMVRKLEDMAARLEYILKFKDIIGLQHIATHHSSWRTPSTSLDVGSNISGRDQDKEAILKLLLDDDHDKTCVIPIVGMGGLGKTTLAQSLYNHDIIKQTFDVRAWICVSDHFDVLKVTKNIAEEMGSACNTNNLNILHQDLKEKLTGKKFIIVLGDVWIEDYDGWNSLIRPFQYGAKGSKIRVTTRIENVATMVQSFQPYHLKKLTDDDCWLVFANHACLSPEKSTEQMDIHKYGKQIVKKCKGLPLAAQSLGGLLRGKRDIKDWNNILNDNIWENESKIIPTLRISYHYLPPYLKRCFVYCSLYPKDYEFDKDDLILLWMAEDLLQPPKNGKTLEEVGYGYFNDLASRSFFNYSPNGKEFRDA 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03096 481 Gene3D - 405 479 IPR036388 -
Mepo4g03096 481 FunFam Probable disease resistance protein At1g61300 149 315 - -
Mepo4g03096 481 Coils Coil 41 61 - -
Mepo4g03096 481 PRINTS Disease resistance protein signature 359 373 - -
Mepo4g03096 481 PRINTS Disease resistance protein signature 261 275 - -
Mepo4g03096 481 PRINTS Disease resistance protein signature 189 204 - -
Mepo4g03096 481 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 419 IPR027417 -
Mepo4g03096 481 Gene3D - 321 404 IPR042197 -
Mepo4g03096 481 Pfam NB-ARC domain 169 396 IPR002182 GO:0043531
Mepo4g03096 481 Gene3D - 152 315 IPR027417 -
Mepo4g03096 481 PANTHER DISEASE RESISTANCE PROTEIN RP 43 470 IPR044974 GO:0006952
Mepo4g03096 481 Gene3D - 15 131 - -
Mepo4g03096 481 Pfam Rx N-terminal domain 10 95 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03096 Mepo-Chr4 40226704 40228149 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03096 175 377 WRKY Transcription Factor Family AT5G45050 25.581 4.38e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03096 - - cam:101497042 728.783