Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo4g03081 | ATGGGACAAGGGCAATCGAAAAGCGAATTGCTTTACCAGCAAGTCAGTTATGGGAATTCCGATGGAATCAAAGCCCTTCATAGAGAAGGTGCAGGTCTTGAGTGGATGGATAAAGAAGGAAAGACACCCTTGATTGTTGCTTGTATGAATCCTGAGCTTTACAATGTTGCTAAGACTTTGATTGAACTTGGAGCCAATGTCAATGCGTACCGCCCTGGTCGTCATGCTGGGAGTCCGTTGCATCATGCAGCTAAAAGGGGACTTGAAAGTATTGTTAAGTTACTTCTTTTACATGGAGCCAATCCTTTGCTCATGAATGATGATTGTCAAACTCCTCTTGAGGTTGCCAGGGCTAAAGGAAACAGCAATGTTGTTCGTGTAATCGAGAGTCATATATGCTTGTTCTCTGGTTGGCTGCGGGAGTTTCATGGACCTGGATTTCTAGAAGTTGTAGCTCCTAATTTGGTATCGAGAAAAGTTTGGGCGGTTGTTTTACCAGTAGGCTCCCGTGTTCTCACCACGCCTTACAAGTTGGAGCTTGCCGTGTATGCTTCTTTGCAGGATGCACGACCCCGTACAATTATTCCTCTGTGGAAGGCCAATTTAGAAGAACCAAAGCTTCGTCAGTCGGATCCATCAGTGGCAATTAGTGATAAGACTACCAGAACACGCCTTAAATTTGGGCCTGCAAGTGAGAATGACAGGCAACAACTTACTTGGTTTTCTAATGCTTGCAAAGGAATGCCGCAGGTAAGTCCAGCATTTTTGCATAATAATCTGCCTACAGTTCCACCAACAGCACCACCTGATGCTGAAGACCCAGAATTGGCTATGGCTATCCAAGCATCTATTCAGCATGCTCTTCACGAGAGGCCAAGCTTTCCTGATGCCCAGCCAAACTCTGAAGCAAGCTCTTCCATCAATGGAGTGAGTGCAGTGCAAGGTTTTCTTGGCACACCAAATATAAATGATAATGAAACTGTAGCTGTTCCAGGTGGCAATACTCAACATGTCCAGAACGATGACAATGTCTCTGCTGGCCATACTACTAGCGGTCTGGATTTGAATCCATCAGCTCCTCCATTTGCTGATGATGTTCAATTAGATGGCTCGATTCGTTATCCGTCAATTGATTCCAGCCCTGTTGATGTATCATCTCCAGTAGTTGAGAAGCTACCTGATGAAGAAGGGAAAACTGCTACTGCTGGTGGAAGTGGTTCAACGTGTGTGATATGTTTAGATGCTCCAGCAGAAGGGGCATGCATACCCTGTGGCCATGTTGCTGGATGCATGTCTTGCTTGAATGAGGTTAAAACAAAGAAATGGGGTTGCCCCGTTTGTCGAGCAAAGATAGACCAGATCATTAAGCTATATCACGTTTGA | 1383 | 0.4519 | MGQGQSKSELLYQQVSYGNSDGIKALHREGAGLEWMDKEGKTPLIVACMNPELYNVAKTLIELGANVNAYRPGRHAGSPLHHAAKRGLESIVKLLLLHGANPLLMNDDCQTPLEVARAKGNSNVVRVIESHICLFSGWLREFHGPGFLEVVAPNLVSRKVWAVVLPVGSRVLTTPYKLELAVYASLQDARPRTIIPLWKANLEEPKLRQSDPSVAISDKTTRTRLKFGPASENDRQQLTWFSNACKGMPQVSPAFLHNNLPTVPPTAPPDAEDPELAMAIQASIQHALHERPSFPDAQPNSEASSSINGVSAVQGFLGTPNINDNETVAVPGGNTQHVQNDDNVSAGHTTSGLDLNPSAPPFADDVQLDGSIRYPSIDSSPVDVSSPVVEKLPDEEGKTATAGGSGSTCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKIDQIIKLYHV | 460 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo4g03081 | 460 | ProSiteProfiles | Ankyrin repeat region circular profile. | 39 | 69 | - | - | |
Mepo4g03081 | 460 | CDD | RING-HC_XBAT35-like | 405 | 458 | - | - | |
Mepo4g03081 | 460 | SMART | ring_2 | 409 | 447 | IPR001841 | - | |
Mepo4g03081 | 460 | MobiDBLite | consensus disorder prediction | 342 | 362 | - | - | |
Mepo4g03081 | 460 | ProSiteProfiles | Ankyrin repeat region circular profile. | 75 | 101 | - | - | |
Mepo4g03081 | 460 | MobiDBLite | consensus disorder prediction | 377 | 401 | - | - | |
Mepo4g03081 | 460 | Pfam | Zinc finger, C3HC4 type (RING finger) | 407 | 454 | - | - | |
Mepo4g03081 | 460 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 389 | 459 | IPR013083 | - | |
Mepo4g03081 | 460 | ProSiteProfiles | Zinc finger RING-type profile. | 409 | 448 | IPR001841 | - | |
Mepo4g03081 | 460 | SMART | ANK_2a | 39 | 69 | IPR002110 | GO:0005515 | |
Mepo4g03081 | 460 | SMART | ANK_2a | 108 | 137 | IPR002110 | GO:0005515 | |
Mepo4g03081 | 460 | SMART | ANK_2a | 75 | 104 | IPR002110 | GO:0005515 | |
Mepo4g03081 | 460 | ProSiteProfiles | Ankyrin repeat profile. | 39 | 72 | IPR002110 | GO:0005515 | |
Mepo4g03081 | 460 | PANTHER | ROLLING PEBBLES, ISOFORM B | 393 | 457 | - | - | |
Mepo4g03081 | 460 | ProSiteProfiles | Ankyrin repeat profile. | 75 | 107 | IPR002110 | GO:0005515 | |
Mepo4g03081 | 460 | MobiDBLite | consensus disorder prediction | 342 | 356 | - | - | |
Mepo4g03081 | 460 | SUPERFAMILY | RING/U-box | 408 | 454 | - | - | |
Mepo4g03081 | 460 | Pfam | Ankyrin repeats (many copies) | 60 | 116 | IPR002110 | GO:0005515 | |
Mepo4g03081 | 460 | Gene3D | - | 3 | 144 | IPR036770 | - | |
Mepo4g03081 | 460 | SUPERFAMILY | Ankyrin repeat | 9 | 133 | IPR036770 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo4g03081 | Mepo-Chr4 | 40113718 | 40120391 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo4g03081 | 403 | 457 | C3H Transcription Factor Family | AT3G06140 | 34.545 | 1.51e-08 | 54.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo4g03081 | - | - | gmx:100789309 | 681.019 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mepo4g03081 | 4 | 40113718 | 40120391 | Mepo4g03081 | 4 | 40113718 | 40120391 | ECH |