Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03076 ATGATGGATCATGTTATTGGTGGAAAATTCAAGCTTGGGAGGAAAATTGGTGGTGGGTCATTTGGAGAGCTTTACTTGGGTGTTAATATACAAACTGGAGAGGAAGTTGCTCTTAAATTGGAACCTGCGAAGACCAAACATCCTCAACTTCATTATGAGTCAAAATTGTACATGCTTCTTCAAGGGGGAACGGGTATTCCCCATTTAAAATGGTTTGGAGTCGAGGGTGACTATAATGCCATGGCAATTGACCTCCTTGGACCAAGTCTGGAAGACTTGTTTAACTATTGCAATAGGAAATTCTCTCTAAAAACAGTTCTGATGCTTGCAGATCAACTACTAAACAGAGTTGAGTACATGCACTCTCGGGGTTTCCTTCACCGTGATATAAAGCCTGACAACTTTTTAATGGGTTTAGGCCGCAAAGCAAATCAGGTATACATAATTGATTATGGCCTTGCGAAAAAGTTCCGAGATCTTCACACACACAAGCATATACCATATAGGGAAAACAAAAACCTCACTGGAACTGCCCGGTATGCGAGTGTTAATACTCATCTAGGAGTTGAACAAAGCAGAAGAGATGATCTGGAATCGCTTGGTTTTGTACTCATGTACTTTTTGAGAGGAAGTCTCCCTTGGCAAGGTTTGAAAGCTGGCAATAAAAAACAAAAATACGACAAGATAAGTGAAAAGAAGATGCTTACTCCTGTAGAGGTTTTGTGCAAGTCACATCCGTTGGAATTTACATCATACTTCCATTACTGCCGATCGTTGCGGTTTGAAGATAAGCCTGATTATTCGTATCTCAAGAGACTCTTTCGTGACCTATTCATCCGAGAAGGCTATCAGTTTGATTATGTGTTTGATTGGACTATATTGAAGTATCCACAAATTGGATCTAGTTCCAGAGCCCGGCCAAGTGGGAAACCAGTCATAAATCCAGGACAATCAGGAGAGAGAGTAGAACGGCCTTCAGGTGGACCAGAGATTCGGGATAGATTCTCGGGTGCAGTTCAGGCATTTGCAAGAAGGAATGGATCTGGCCATGGTGATCATTCCAGGCATAGATCTTCAGATGATGTGCCATCTTCTAAAGACGTGCAAGCTGATTCTGAGAGGCCACGTAGCTCTTCTCGTCATGGCAGTTCTTCCAAAAGACCTGTCTTATCAAGCAGCCGTCCAAATTCTTCTGGTGAACCGAGTGAAAGCCGCTCTAGCCGATTGCTCTTGAGCAGTAGCAGACTATCTACTACTCAGAGGACTCAACCAGGTCTTGAGTCCAAATCATCATCATTTAATAATCGGGCTTCTGGGGCAAGAGGTGGTCGTGATGATACACTCAGGAGCTTTGAACTCCTTTCACTTGGCACAGGAAAAAGGAAATGA 1389 0.4298 MMDHVIGGKFKLGRKIGGGSFGELYLGVNIQTGEEVALKLEPAKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNAMAIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLLNRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKFRDLHTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGFVLMYFLRGSLPWQGLKAGNKKQKYDKISEKKMLTPVEVLCKSHPLEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRARPSGKPVINPGQSGERVERPSGGPEIRDRFSGAVQAFARRNGSGHGDHSRHRSSDDVPSSKDVQADSERPRSSSRHGSSSKRPVLSSSRPNSSGEPSESRSSRLLLSSSRLSTTQRTQPGLESKSSSFNNRASGARGGRDDTLRSFELLSLGTGKRK 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03076 462 SMART serkin_6 10 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g03076 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Mepo4g03076 462 ProSiteProfiles Protein kinase domain profile. 10 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g03076 462 FunFam Casein kinase 1-like protein 2 330 - -
Mepo4g03076 462 MobiDBLite consensus disorder prediction 344 462 - -
Mepo4g03076 462 MobiDBLite consensus disorder prediction 301 332 - -
Mepo4g03076 462 Pfam Protein kinase domain 11 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g03076 462 MobiDBLite consensus disorder prediction 348 380 - -
Mepo4g03076 462 CDD STKc_CK1_delta_epsilon 9 283 - -
Mepo4g03076 462 Gene3D Transferase(Phosphotransferase) domain 1 1 323 - -
Mepo4g03076 462 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Mepo4g03076 462 FunFam Putative Casein kinase I 2 86 - -
Mepo4g03076 462 MobiDBLite consensus disorder prediction 382 438 - -
Mepo4g03076 462 PANTHER CASEIN KINASE-RELATED 9 398 - -
Mepo4g03076 462 SUPERFAMILY Protein kinase-like (PK-like) 5 291 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03076 Mepo-Chr4 40056203 40064333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03076 9 214 MAP Kinase Kinase Kinase AT3G06030 25.926 6.89e-14 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mepo4g03076 Pkinase 4.7e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03076 K08960 - cave:132177205 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03076 4 40056203 40064333 Mepo4g03076 4 40056203 40064333 ECH