Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03075 ATGGCTACCAATAACCACAGCAATAATACTATTGCATGCAAATTGTGCTACAAAGTTTTCACAAACGTTCGATTTCTCATAACCCATATGGAGTCTCATATGGTTGAAGAAAATTTAGCCCTAGGCAGGCTAACCAACATCAACCCTCAGATTGAGGCACCACCTTTGCCAATACCTCGACCAAGAATGTTTAGTCAAATGCATGCTGTTGTTTCACATCCACCCCATGTTTTACAACTTGATATGCCATTTGCTGAGAAAAATGTTGCTGAAATGGATTTGTCACCAACTTCACCAACCCATGAAGATTATATGGAAGTTTCTCACATTGATGGAACTAAGCCATATATCAATAAACTAGATAAACCCATCGATAAGATTATTGATAATCCAGCTATTGCGATCAATGATGGCACATTGAATCTAGAATTAGGGCTCTAA 441 0.381 MATNNHSNNTIACKLCYKVFTNVRFLITHMESHMVEENLALGRLTNINPQIEAPPLPIPRPRMFSQMHAVVSHPPHVLQLDMPFAEKNVAEMDLSPTSPTHEDYMEVSHIDGTKPYINKLDKPIDKIIDNPAIAINDGTLNLELGL 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03075 146 SUPERFAMILY beta-beta-alpha zinc fingers 9 38 IPR036236 -
Mepo4g03075 146 ProSitePatterns Zinc finger C2H2 type domain signature. 13 33 IPR013087 -
Mepo4g03075 146 ProSiteProfiles Zinc finger C2H2 type domain profile. 11 38 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03075 Mepo-Chr4 40050312 40050752 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo4g03075 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03075 - K09228 pvu:PHAVU_007G056300g 64.6994