Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03052 ATGATGTTTCAGGAAAGTAGTATGAGAGCCAAGAGTTTGATAAGTAAGAAGAAGTTTAGCATAAGAAGGGAATTGAGGAAGATGATAAAGTGTGTGTGTTCAAAGGAGAAGTTAAGTGTAGATGAAATGAATTATTCATCAGAGTCCCTTGCAACTAGGGACTATTCAGCAACAGCAAGTGGTTATTCATCTCGTCCAGGTGAAAATGATACAAAGTTGGATAATAGTAACATTGAAGAAGCTGAATCCTCTCTACGTGAAAGTGGTTATTTAAACTACGAGGAAGCTAGAGCCTTGTTAGGAAGACTTGAGTATCAAAAAGGCAACATTGAAGCTGCACTTCATGTATTTGAAGGAATAGATATTGCTGCTGTCATTCCAAAGATGAAAATGTCTATATCTAGAAAATGTGAATCCAATAATAAACGCAGTCCACAACGTGATTCAGTGCCTTCTATGTCGATACATGCTGTTAGTTTACTTCTTGAAGCTGTTTTTCTCAAGGCTAAATCATTGCAAACTCTTGGAAGGTTTCAAGAAGCTGCTCAATCTTGCAAAACTATTTTAGACACCGTTGAATCTGCATTACCAGAAGGTTGGCCCGAAAACTTTGTTTCAGATTGTAAATTACAAGAGATAGTAACAAATGCTGTAGAACTGCTTCCGGAGTTATGGAACCTCGCAGGCTCACCTCAAGATGTTATCCTATCATTTAGGAAAGCCTTGCTTTATCATTGGAATCTTGACACAGAATCAACTGCAAGAATACAAAAGGAATTTGCTTTGTTTCTTTTGTACAGCGGCTACGAAGCGGACTCTCCTCCGCTTCGGTCTCAGTTGGACGGTTCGTTTGTGCCAAGAAACAACATAGAAGAAGCTGTTCTTCTACTTCTGATTCTGCTGAGAAATTCTAAAGATCGTTCAATAATTCACCACCTTTCTTTCGCGCTGAGTGTTTGTGGTGAATTCATGACACTAGCTCAACAAGTTGAGGAATTACTTCCAGAAACAATGGAGAGAAGAGAAAGATATTACACTCTAGCTCTTTGTTACTGCGGTGAAGGTGAGCATATAGTTGCTTTGGATCTTTTGAGGAACTTTTTGAAAAATAGAGAGAACTCGGTATACTCAGATTGCATAGAGGAATTGCTATTAGCTTCAAAAATTTGTGCAGACAACAAGGTTTGTATCGAAGACGGAATCAAATTTTCAACCAAAGCAATTTCTCAGATGCATGGAAAATGTAATCAAATAGAAGCTATTGCAAATTGTTTATTAGGTGTTCTACTGTCAGCAAAATCGAAGTCAGTTACTTCTGAATCAGAGAAAGTTTTGATCCAATCTCAAGCATTCAGTGCTTTAAGAGCTTCTGAGAAATTGATGAAGGAAAATGATCCTTACATTGTTCTTAATCTTTGTCTAGAATATGCTGAGCATAGAAAGTTAAGAGTTGCTTATGATCACGCAAAGAAACTGATTAAGCTGGAAGGTGGATCGAGTATTAGCGGATATATACTATTAGCGCGGATTTTATCGGCTCAAAAAAAGTTTGTTGATGCGGAGATTGTTATTGATGCTGCTTTAGATCAAAGCGGAAAATGGGATCAAGGAGAACTGTTGAGAACTAAAGCTAAGATTCAGATTGCACAGGGAAGATTAAAAAATGCTATTGAGACATACACTTTTTTTCTTGCGATTCTTCAAGTCCATAATAAAAATCTAGGAACTGCAAATAAGGTTATGAAGTGTAAGAGAAATCGCGACAGAAGACTAGAAATGGAAGTTTGGCATGATTTAGCCAATGTGTACACAGCCTTGTCACGGTGGCATGATGCCGAAGTTTGTCTTGCTAAATCTCAAGCTATTGATCCTTATTCCGCTTCTAGATTGCACTCCACAGGTTTACTTCATGAAGCAAGAGGTCTTCATCAAGAAGCATTGAAATCATATAGAAAAGCATTAGATATTGAGCCAAACCATGTGGGAAGTTTGATATCAACAGCTTGTGTTCTGAGAAAACTTGGTGGTCACTCGTCATCTTCAATTGTTAGAAGCCTTCTCACTGATGCATTAAAGCTTGACACAACAAACTCATCTGCATGGTACAATCTTGGACTTCTCTACAAAGCTGATTTGGGAACATCAGCATTGGAAGCTGCTGAATGCTTTGAAGCAGCTGTTTTTCTTGAAGAATCATCTCCCATTGAACCCTTTAGACAATAA 2223 0.3792 MMFQESSMRAKSLISKKKFSIRRELRKMIKCVCSKEKLSVDEMNYSSESLATRDYSATASGYSSRPGENDTKLDNSNIEEAESSLRESGYLNYEEARALLGRLEYQKGNIEAALHVFEGIDIAAVIPKMKMSISRKCESNNKRSPQRDSVPSMSIHAVSLLLEAVFLKAKSLQTLGRFQEAAQSCKTILDTVESALPEGWPENFVSDCKLQEIVTNAVELLPELWNLAGSPQDVILSFRKALLYHWNLDTESTARIQKEFALFLLYSGYEADSPPLRSQLDGSFVPRNNIEEAVLLLLILLRNSKDRSIIHHLSFALSVCGEFMTLAQQVEELLPETMERRERYYTLALCYCGEGEHIVALDLLRNFLKNRENSVYSDCIEELLLASKICADNKVCIEDGIKFSTKAISQMHGKCNQIEAIANCLLGVLLSAKSKSVTSESEKVLIQSQAFSALRASEKLMKENDPYIVLNLCLEYAEHRKLRVAYDHAKKLIKLEGGSSISGYILLARILSAQKKFVDAEIVIDAALDQSGKWDQGELLRTKAKIQIAQGRLKNAIETYTFFLAILQVHNKNLGTANKVMKCKRNRDRRLEMEVWHDLANVYTALSRWHDAEVCLAKSQAIDPYSASRLHSTGLLHEARGLHQEALKSYRKALDIEPNHVGSLISTACVLRKLGGHSSSSIVRSLLTDALKLDTTNSSAWYNLGLLYKADLGTSALEAAECFEAAVFLEESSPIEPFRQ 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03052 740 Pfam Tetratricopeptide repeat 634 660 IPR019734 GO:0005515
Mepo4g03052 740 SMART tpr_5 162 195 IPR019734 GO:0005515
Mepo4g03052 740 SMART tpr_5 593 626 IPR019734 GO:0005515
Mepo4g03052 740 SMART tpr_5 501 534 IPR019734 GO:0005515
Mepo4g03052 740 SMART tpr_5 627 660 IPR019734 GO:0005515
Mepo4g03052 740 SMART tpr_5 537 570 IPR019734 GO:0005515
Mepo4g03052 740 SUPERFAMILY TPR-like 537 709 IPR011990 GO:0005515
Mepo4g03052 740 SUPERFAMILY TPR-like 332 560 IPR011990 GO:0005515
Mepo4g03052 740 Gene3D Tetratricopeptide repeat domain 592 735 IPR011990 GO:0005515
Mepo4g03052 740 Gene3D Tetratricopeptide repeat domain 439 591 IPR011990 GO:0005515
Mepo4g03052 740 ProSiteProfiles TPR repeat profile. 627 660 IPR019734 GO:0005515
Mepo4g03052 740 PANTHER PROTEIN NPG1 29 739 IPR043376 -
Mepo4g03052 740 Gene3D Tetratricopeptide repeat domain 73 426 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03052 Mepo-Chr4 39838383 39842189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03052 3 739 Calmodulin-binding Proteins AT4G28600 50.331 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03052 K21843 - gmx:100789469 1130.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03052 4 39838383 39842189 Mepo4g03052 4 39838383 39842189 ECH