Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03034 ATGGTTTCAACAGAAACTCAAGTTTGGCGCAAAGGACCATATGAGACGCCAATATTGTGTAACGCTTGTGGTTTACATTTCAAGGCGAAAGGAACCCTTGCTAACTATCTCCCGAAGAGAGCCCTGCAAAATCAGTCGTTGGACCTTGACATTGAAAAAGCATCTGAAAGTAGTGCAAATCTTTCAAACCAAACTCCAGGTTGGAAAAATACAAATTTATGGAACGTCAAAATCCCACAAAAAAAGCGTTCATTTGTAGAGAGGCATCCACCGATTGAGACGTCGACACCAATGGAGACGCTGACATCAATGGATGAGTTTCAACAACAACTTAGCAATCTATGGGAATCTGAGAAAGAAGAAAATGAATCATCTCCTGACAATATTTTGTTGTTTGATAAAACGAACAACTTTATACCAAGCAATGAGATAGGTCTTGGATGCATTCGTCTAAAGACAAATGTTACTTCTACAAATCAAGATGGTTCATCTACATAG 498 0.3896 MVSTETQVWRKGPYETPILCNACGLHFKAKGTLANYLPKRALQNQSLDLDIEKASESSANLSNQTPGWKNTNLWNVKIPQKKRSFVERHPPIETSTPMETLTSMDEFQQQLSNLWESEKEENESSPDNILLFDKTNNFIPSNEIGLGCIRLKTNVTSTNQDGSST 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03034 165 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 36 - -
Mepo4g03034 165 CDD ZnF_GATA 3 32 IPR000679 GO:0006355|GO:0043565
Mepo4g03034 165 ProSiteProfiles GATA-type zinc finger domain profile. 1 45 IPR000679 GO:0006355|GO:0043565
Mepo4g03034 165 SMART GATA_3 3 44 IPR000679 GO:0006355|GO:0043565
Mepo4g03034 165 Pfam GATA zinc finger 4 32 IPR000679 GO:0006355|GO:0043565
Mepo4g03034 165 Coils Coil 44 64 - -
Mepo4g03034 165 Gene3D - 2 60 IPR013088 GO:0006355|GO:0008270
Mepo4g03034 165 PANTHER OSJNBB0038F03.10 PROTEIN 54 159 IPR044589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03034 Mepo-Chr4 39600864 39601550 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03034 4 82 C2C2-Gata Transcription Factor Family AT5G47140 40.506 1.75e-09 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mepo4g03034 GATA 1.7e-09 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03034 - - psat:127115742 146.747