Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03019 ATGGATTCAAGTTCAACCTCAATACCAAACTCTTCCACTTCAGATTTTTCATCAGAATCCTCCTCCTATGAATTCAACTATCTTCCCTTCAACGAGAACGATCCCGAAGAGATGCTTCTCTATGGCATGATCAACGACGCCAACAACCTCAACAACACAACAGTGAAGGAAGAAGAGGTAAGTTCTGAAGAGAACGAACCGAGGAAGGAGAAGTCGTACCGAGGTGTAAGGAGAAGACCATGGGGGAAATTTGCAGCAGAGATAAGGGATTCGACGAGGAATGGAATGAGGGTGTGGTTAGGAACGTTTGATAGTGCAGAAGCTGCTGCTTTGGCTTATGATCAAGCTGCTTTTTCCATGAGAGGTTCTTCTGCAATACTCAATTTCCCTGTTGAGATTGTTAGAGAATCGCTTAGTGATATGAATTGTGATGATGGTTCTGAAGATGGATGTTCCCCTGTTGTTGCTCTTAAGAGGAAACATTCTTTGAGAAGGAAAATTGGTTTCAAGAAGAACAAAGAAAGAGATTTTAGGAGCAATAATAGTAGTGTTGATAATGCTGTTGTGTTTGAAGATCTTGGTGCTGATTATTTGGAACAATTGTTGATTTCCTCTGATAAGTTTCCATATCCTCCTAAGTGA 642 0.4097 MDSSSTSIPNSSTSDFSSESSSYEFNYLPFNENDPEEMLLYGMINDANNLNNTTVKEEEVSSEENEPRKEKSYRGVRRRPWGKFAAEIRDSTRNGMRVWLGTFDSAEAAALAYDQAAFSMRGSSAILNFPVEIVRESLSDMNCDDGSEDGCSPVVALKRKHSLRRKIGFKKNKERDFRSNNSSVDNAVVFEDLGADYLEQLLISSDKFPYPPK 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03019 213 PANTHER DNA-BINDING DOMAIN 22 203 IPR044808 GO:0003700|GO:0009873
Mepo4g03019 213 MobiDBLite consensus disorder prediction 1 21 - -
Mepo4g03019 213 FunFam Ethylene-responsive transcription factor 2 71 132 - -
Mepo4g03019 213 SUPERFAMILY DNA-binding domain 72 132 IPR016177 GO:0003677
Mepo4g03019 213 MobiDBLite consensus disorder prediction 57 73 - -
Mepo4g03019 213 Pfam AP2 domain 72 122 IPR001471 GO:0003700|GO:0006355
Mepo4g03019 213 SMART rav1_2 72 136 IPR001471 GO:0003700|GO:0006355
Mepo4g03019 213 CDD AP2 71 131 IPR001471 GO:0003700|GO:0006355
Mepo4g03019 213 PRINTS Ethylene responsive element binding protein signature 112 132 IPR001471 GO:0003700|GO:0006355
Mepo4g03019 213 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Mepo4g03019 213 ProSiteProfiles AP2/ERF domain profile. 72 130 IPR001471 GO:0003700|GO:0006355
Mepo4g03019 213 MobiDBLite consensus disorder prediction 54 74 - -
Mepo4g03019 213 Gene3D AP2/ERF domain 71 132 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03019 Mepo-Chr4 39331946 39333128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03019 28 206 AP2-EREBP Transcription Factor Family AT3G23240 65.000 1.08e-76 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo4g03019 AP2 7.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03019 K14516 - gmx:100790598 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03019 4 39331946 39333128 Mepo4g03019 4 39331946 39333128 ECH