Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03017 ATGGAGGATCATCAGAAGGGAAAGCATGGAAAGGAGGAGAAGGGAAAGGAGGAGGTTCGATTCCGAGGCGTGAGGAGGAGGCCGTGGGGGAAGTACGCGGCGGAGATAAGGGATCCATCTAAGCAAGGGACAAGGATGTGGTTAGGGACATTTGATACGGCTGAAGAAGCAGCAAGAGCTTATGATCGAGCAGCTTTTAATTTGAGGGGTCATCTTGCAATTTTGAATTTTCCTAGTGAGTATTATTCTAAAATAAGAGGGTCACCACCATATCCACCTCATTTAGCACCACCATCCTACACCACTTCATCATCTCATCATGCTAGTGGTAGTTCTTCTGGGCCACAACATAGGCCCATCTTTGAGTTTGAGTGTTTGGATGATAAGATACTGGAGGAACTTCTTGGGTCGGAGGAGGTGAAAAAGAAAAAGTAG 435 0.4644 MEDHQKGKHGKEEKGKEEVRFRGVRRRPWGKYAAEIRDPSKQGTRMWLGTFDTAEEAARAYDRAAFNLRGHLAILNFPSEYYSKIRGSPPYPPHLAPPSYTTSSSHHASGSSSGPQHRPIFEFECLDDKILEELLGSEEVKKKK 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03017 144 CDD AP2 20 78 IPR001471 GO:0003700|GO:0006355
Mepo4g03017 144 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Mepo4g03017 144 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Mepo4g03017 144 ProSiteProfiles AP2/ERF domain profile. 20 78 IPR001471 GO:0003700|GO:0006355
Mepo4g03017 144 MobiDBLite consensus disorder prediction 98 116 - -
Mepo4g03017 144 SUPERFAMILY DNA-binding domain 21 79 IPR016177 GO:0003677
Mepo4g03017 144 MobiDBLite consensus disorder prediction 86 119 - -
Mepo4g03017 144 MobiDBLite consensus disorder prediction 1 22 - -
Mepo4g03017 144 Gene3D AP2/ERF domain 19 79 IPR036955 GO:0003700|GO:0006355
Mepo4g03017 144 SMART rav1_2 20 84 IPR001471 GO:0003700|GO:0006355
Mepo4g03017 144 Pfam AP2 domain 20 71 IPR001471 GO:0003700|GO:0006355
Mepo4g03017 144 PANTHER DNA-BINDING DOMAIN 9 131 IPR044808 GO:0003700|GO:0009873
Mepo4g03017 144 FunFam Ethylene-responsive transcription factor 2 19 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03017 Mepo-Chr4 39307085 39308033 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03017 18 142 AP2-EREBP Transcription Factor Family AT3G23230 64.000 5.15e-51 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo4g03017 AP2 1.6e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03017 - - gmx:100793703 194.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03017 4 39307085 39308033 Mepo4g03017 4 39307085 39308033 ECH