Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03016 ATGAGTGAAGGTGGATCAAGGAGAGGAGCCAAGAACAACCGCGGACATGTCCAGTACCGAGGCGTTCTCTGCACGCCTTGGGGTAAGTTTGCCGCCGGGGTTCGTGACCCCAACAGGGAGGGTCGGAAGCTGTGGATTGGATGTTTCCACACTGCTGATGAAGCGGCTAGAGCTTATGATAGAGCTGCTTATAATATGAGTGGTTCATCTGCAATTCTTAATTTTCCAAATGAGTACAATATGGCTTCTCATGCTGGTTCAACATCTTCAAGCAATGTGTTTGAGATTGAATACTTGGATCTCGATAACTGGTTGGACTTGTTGGAGGTGGTTGTTGATCAAGCGGAGAAAAATAATAGGGGGCCCTGA 369 0.477 MSEGGSRRGAKNNRGHVQYRGVLCTPWGKFAAGVRDPNREGRKLWIGCFHTADEAARAYDRAAYNMSGSSAILNFPNEYNMASHAGSTSSSNVFEIEYLDLDNWLDLLEVVVDQAEKNNRGP 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03016 122 SUPERFAMILY DNA-binding domain 18 77 IPR016177 GO:0003677
Mepo4g03016 122 SMART rav1_2 18 82 IPR001471 GO:0003700|GO:0006355
Mepo4g03016 122 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
Mepo4g03016 122 Pfam AP2 domain 18 68 IPR001471 GO:0003700|GO:0006355
Mepo4g03016 122 PANTHER DNA-BINDING DOMAIN 14 88 IPR044808 GO:0003700|GO:0009873
Mepo4g03016 122 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Mepo4g03016 122 PRINTS Ethylene responsive element binding protein signature 58 78 IPR001471 GO:0003700|GO:0006355
Mepo4g03016 122 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03016 Mepo-Chr4 39296493 39296861 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03016 1 100 AP2-EREBP Transcription Factor Family AT5G43410 49.565 1.23e-29 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo4g03016 AP2 2.6e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03016 - - mtr:25484431 221.861