Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03015 ATGAACTACGGCGGACATGTCCCGTACCGAGGCGTTGTCTGCACGCCTTGGGGAAACTTCGCTGCGGGGATTCGCGATCCCAACCGGGGTGGTCAGAGGCTGTGGCTTGGATGTTTCCACACTGCTGAGGAAGCGGCTAGAGCTTATGATAGAGCTGCTTATAATATGAGAGGTTATTTTGCAGTTCTTAATTTTCCAAATGAGTACAATATGGCTGCTGGTGGTTCTGGTTCAACATCTTCAAGTAATATGTTTGAGTTTGAGTTCTTGGATCTCGATAGCTTGTTGGACTTGTTGGAGGTGGTTCTTGATCATGTGGAGAAAAAGAATAGGGGACCCTGA 342 0.4766 MNYGGHVPYRGVVCTPWGNFAAGIRDPNRGGQRLWLGCFHTAEEAARAYDRAAYNMRGYFAVLNFPNEYNMAAGGSGSTSSSNMFEFEFLDLDSLLDLLEVVLDHVEKKNRGP 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03015 113 ProSiteProfiles AP2/ERF domain profile. 8 66 IPR001471 GO:0003700|GO:0006355
Mepo4g03015 113 SMART rav1_2 8 72 IPR001471 GO:0003700|GO:0006355
Mepo4g03015 113 Pfam AP2 domain 9 58 IPR001471 GO:0003700|GO:0006355
Mepo4g03015 113 SUPERFAMILY DNA-binding domain 9 67 IPR016177 GO:0003677
Mepo4g03015 113 Gene3D AP2/ERF domain 8 67 IPR036955 GO:0003700|GO:0006355
Mepo4g03015 113 PRINTS Ethylene responsive element binding protein signature 32 48 IPR001471 GO:0003700|GO:0006355
Mepo4g03015 113 PRINTS Ethylene responsive element binding protein signature 9 20 IPR001471 GO:0003700|GO:0006355
Mepo4g03015 113 PANTHER DNA-BINDING DOMAIN 9 76 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03015 Mepo-Chr4 39285592 39286111 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03015 9 109 AP2-EREBP Transcription Factor Family AT3G23230 46.341 7.06e-31 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo4g03015 AP2 1.8e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03015 - - mtr:25484431 144.436