Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03014 ATGAGTGAAGATGGATCAAGGAGAGAGGCCAATGACGACGGCGGATATGTCAAGTACCGAGGCGTTCGCTGCCGGCCATGGGGAAAGTTTGCGGCCGAGATTCGTGACTCCAATAGGCAAGGTCAGAATAAGGTGTGGCTAGGAACTTTCAACACTGCTGAGGAAGCGGCTAGAGCTTATGATAGAGCTGCTTTTAATATGAGGGGTCCTTTAGCCATCCTTAATTTTCCAAATGAGTACAATATGTTTGCTGGTGCCGTTTCAGGTTCTGGTTCATCATCTTCAAGGATTGCAAATGCTGGCAATGGAAGAGTGTTTGATTTTGAGTACCTGGATTATAATTTATTGGAGGAGCTTCTTGATGTTGAGGGGAAAAAGAACCAAGGACCCTGA 393 0.4606 MSEDGSRREANDDGGYVKYRGVRCRPWGKFAAEIRDSNRQGQNKVWLGTFNTAEEAARAYDRAAFNMRGPLAILNFPNEYNMFAGAVSGSGSSSSRIANAGNGRVFDFEYLDYNLLEELLDVEGKKNQGP 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03014 130 SUPERFAMILY DNA-binding domain 18 78 IPR016177 GO:0003677
Mepo4g03014 130 ProSiteProfiles AP2/ERF domain profile. 18 77 IPR001471 GO:0003700|GO:0006355
Mepo4g03014 130 Gene3D AP2/ERF domain 17 78 IPR036955 GO:0003700|GO:0006355
Mepo4g03014 130 PANTHER DNA-BINDING DOMAIN 12 88 IPR044808 GO:0003700|GO:0009873
Mepo4g03014 130 SMART rav1_2 18 83 IPR001471 GO:0003700|GO:0006355
Mepo4g03014 130 FunFam Ethylene-responsive transcription factor 2 18 78 - -
Mepo4g03014 130 CDD AP2 18 78 IPR001471 GO:0003700|GO:0006355
Mepo4g03014 130 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Mepo4g03014 130 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Mepo4g03014 130 Pfam AP2 domain 18 69 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03014 Mepo-Chr4 39282012 39282404 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03014 13 126 AP2-EREBP Transcription Factor Family AT3G23230 56.349 7.23e-37 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mepo4g03014 AP2 1.5e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03014 - - gmx:100775830 139.428