Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03013 ATGAGTGAACATGGATCAAGGGGAGGGGCCAAGGACGATGGTGGACAAGTCAAGTACCGAGGCGTTCGCTGCCGGCCATGGGGAAAATTTGCGGCTGAGATTCGTGACTCGAATAGGCAAGGTCAGAGGATATGGCTTGGAACTTTCAACACTGCTGAGGAAGCTGCTAGAGCTTATGATAGAGCTGCTTTTAATATGAGAGGTTCTTTTGCAATTCTTAATTTTCCAAATGAGTATAATATGTTTGCTGGTGCCGGTTCTGGTTCTGGTTCTGGCTCTGGTTCATCATCTTCAAGGAATGCAAATGCTGGCAATGGAAGACAAGTGTTTGAGTTTGAGTACTTGGATGATAACTTATTGGAGGAGCTTCTTGATGTTGAAGAGAAAAAGAATAAAGGATCCTGA 405 0.4444 MSEHGSRGGAKDDGGQVKYRGVRCRPWGKFAAEIRDSNRQGQRIWLGTFNTAEEAARAYDRAAFNMRGSFAILNFPNEYNMFAGAGSGSGSGSGSSSSRNANAGNGRQVFEFEYLDDNLLEELLDVEEKKNKGS 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03013 134 SUPERFAMILY DNA-binding domain 18 77 IPR016177 GO:0003677
Mepo4g03013 134 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
Mepo4g03013 134 FunFam Ethylene-responsive transcription factor 2 18 77 - -
Mepo4g03013 134 Pfam AP2 domain 18 68 IPR001471 GO:0003700|GO:0006355
Mepo4g03013 134 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
Mepo4g03013 134 CDD AP2 18 77 IPR001471 GO:0003700|GO:0006355
Mepo4g03013 134 PANTHER DNA-BINDING DOMAIN 16 128 IPR044808 GO:0003700|GO:0009873
Mepo4g03013 134 SMART rav1_2 18 82 IPR001471 GO:0003700|GO:0006355
Mepo4g03013 134 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Mepo4g03013 134 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03013 Mepo-Chr4 39277728 39278318 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03013 13 130 AP2-EREBP Transcription Factor Family AT3G23230 63.200 3.83e-47 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo4g03013 AP2 2.4e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03013 - - gmx:100775830 145.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03013 4 39277728 39278318 Mepo4g03013 4 39277728 39278318 ECH