Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo4g03013 | ATGAGTGAACATGGATCAAGGGGAGGGGCCAAGGACGATGGTGGACAAGTCAAGTACCGAGGCGTTCGCTGCCGGCCATGGGGAAAATTTGCGGCTGAGATTCGTGACTCGAATAGGCAAGGTCAGAGGATATGGCTTGGAACTTTCAACACTGCTGAGGAAGCTGCTAGAGCTTATGATAGAGCTGCTTTTAATATGAGAGGTTCTTTTGCAATTCTTAATTTTCCAAATGAGTATAATATGTTTGCTGGTGCCGGTTCTGGTTCTGGTTCTGGCTCTGGTTCATCATCTTCAAGGAATGCAAATGCTGGCAATGGAAGACAAGTGTTTGAGTTTGAGTACTTGGATGATAACTTATTGGAGGAGCTTCTTGATGTTGAAGAGAAAAAGAATAAAGGATCCTGA | 405 | 0.4444 | MSEHGSRGGAKDDGGQVKYRGVRCRPWGKFAAEIRDSNRQGQRIWLGTFNTAEEAARAYDRAAFNMRGSFAILNFPNEYNMFAGAGSGSGSGSGSSSSRNANAGNGRQVFEFEYLDDNLLEELLDVEEKKNKGS | 134 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo4g03013 | 134 | SUPERFAMILY | DNA-binding domain | 18 | 77 | IPR016177 | GO:0003677 | |
Mepo4g03013 | 134 | Gene3D | AP2/ERF domain | 17 | 77 | IPR036955 | GO:0003700|GO:0006355 | |
Mepo4g03013 | 134 | FunFam | Ethylene-responsive transcription factor 2 | 18 | 77 | - | - | |
Mepo4g03013 | 134 | Pfam | AP2 domain | 18 | 68 | IPR001471 | GO:0003700|GO:0006355 | |
Mepo4g03013 | 134 | ProSiteProfiles | AP2/ERF domain profile. | 18 | 76 | IPR001471 | GO:0003700|GO:0006355 | |
Mepo4g03013 | 134 | CDD | AP2 | 18 | 77 | IPR001471 | GO:0003700|GO:0006355 | |
Mepo4g03013 | 134 | PANTHER | DNA-BINDING DOMAIN | 16 | 128 | IPR044808 | GO:0003700|GO:0009873 | |
Mepo4g03013 | 134 | SMART | rav1_2 | 18 | 82 | IPR001471 | GO:0003700|GO:0006355 | |
Mepo4g03013 | 134 | PRINTS | Ethylene responsive element binding protein signature | 19 | 30 | IPR001471 | GO:0003700|GO:0006355 | |
Mepo4g03013 | 134 | PRINTS | Ethylene responsive element binding protein signature | 42 | 58 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo4g03013 | Mepo-Chr4 | 39277728 | 39278318 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo4g03013 | 13 | 130 | AP2-EREBP Transcription Factor Family | AT3G23230 | 63.200 | 3.83e-47 | 147 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Mepo4g03013 | AP2 | 2.4e-16 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo4g03013 | - | - | gmx:100775830 | 145.206 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mepo4g03013 | 4 | 39277728 | 39278318 | Mepo4g03013 | 4 | 39277728 | 39278318 | ECH |