Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03011 ATGGATGAGTTGTTAGCACCATTAGCTTCATCTCTTTCTTCTGATATTGTTCACTATGACTCAATCGATCTATATTCTTGGGTTCAAACCATGCTTACTGAACTCAACCCTGATTCTCAAATCAACGACCCTTTGACTTCTTTGGATTCTTCTTCTTCTTCAATCCCCAACAACACTTTCAATGATGATTATGAGTATGATCTTAGCGTTATTCCTGGAATGGCAGCATACCCACCTCAAGAAGAAAACACAGCCACGAAACGCATGCAGACTTGGTCTGAATCAGAATCTAGAGATATTAGTCTTCTGGCGGTTCCGACGATGTCACCACCGGCGGTGGAAAATACAAGATCGGTGGTTCTTGTTGATACACAAGAAACCGGTGTTCATCTTGTTCATAATTTAATGGCTTGTGCAGATGCGATTCAGCAAGAGAATCTGAAACTTGTAGAAGCGCTTGTGAAGCATATAAGCTTATTAGCTTCGTTACAAACCAGTGCTATGAGAAAAGTTGCTTCTTATTTCGCAAACCAGTGA 537 0.4078 MDELLAPLASSLSSDIVHYDSIDLYSWVQTMLTELNPDSQINDPLTSLDSSSSSIPNNTFNDDYEYDLSVIPGMAAYPPQEENTATKRMQTWSESESRDISLLAVPTMSPPAVENTRSVVLVDTQETGVHLVHNLMACADAIQQENLKLVEALVKHISLLASLQTSAMRKVASYFANQ 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03011 178 ProSiteProfiles GRAS family profile. 122 178 IPR005202 -
Mepo4g03011 178 Gene3D - 1 35 IPR038088 -
Mepo4g03011 178 Pfam Transcriptional regulator DELLA protein N terminal 9 38 IPR021914 -
Mepo4g03011 178 Pfam GRAS domain family 131 177 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03011 Mepo-Chr4 39249133 39249669 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03011 8 176 GRAS Transcription Factor Family AT3G03450 45.665 2.73e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mepo4g03011 GRAS 4.4e-08 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03011 K14494 - gmx:100799695 166.392