Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02997 ATGGAGGTAGCCGGTGGAGCTGATATAGCAGAAAGTGTGGCACAATTCGCAAGAAGGCGTCAACGTGGTGTTTGTGTTCTTAGTGGAAGTGGCTCTGTAGCTAATGTTACTCTTAGACAACCTTCAGCTCCCGGTGCTGTTGTAGCACTACATGGTAGGTTTGAGATTTTGTCCTTAACCGGGACTTTTCTACCCGGTCCTGCTCCACCAGGTTCAACTGGTCTTACAGTGTACTTGGCTGGAGGTCAGGGTCAGGTAGTTGGAGGTTGTGTTGTTGGAACTCTTGTTGCAGTTGGACCTGTTATGCTTATTGCTGCTACGTTTACTAATGCTACTTATGAGAGACTTCCACTTGATGACGATGAAAATGATAATAATGAAGGGCCTAGTTCTGCGGGAGGTGTGCAAGGTGGTGGATCGCCTCCACCGGGAATTGGTCATCAGTTGCATAGTGGGCTTCCAGATCATCCTTCTTCCATGCCTTTGTATAATTTGCCACCAAATTTGTTGCCTAATAATGGAGAGCAGATGGGACATGAGGCTCTTGCCTGGGCTGCTGCTCATGGAAGACCACCTTATTGA 582 0.4777 MEVAGGADIAESVAQFARRRQRGVCVLSGSGSVANVTLRQPSAPGAVVALHGRFEILSLTGTFLPGPAPPGSTGLTVYLAGGQGQVVGGCVVGTLVAVGPVMLIAATFTNATYERLPLDDDENDNNEGPSSAGGVQGGGSPPPGIGHQLHSGLPDHPSSMPLYNLPPNLLPNNGEQMGHEALAWAAAHGRPPY 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02997 193 CDD DUF296 2 80 IPR005175 -
Mepo4g02997 193 ProSiteProfiles PPC domain profile profile. 1 130 IPR005175 -
Mepo4g02997 193 MobiDBLite consensus disorder prediction 116 168 - -
Mepo4g02997 193 Gene3D - 1 125 - -
Mepo4g02997 193 FunFam AT-hook motif nuclear-localized protein 1 123 - -
Mepo4g02997 193 Pfam Plants and Prokaryotes Conserved (PCC) domain 2 110 IPR005175 -
Mepo4g02997 193 SUPERFAMILY AF0104/ALDC/Ptd012-like 2 121 - -
Mepo4g02997 193 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 188 IPR014476 GO:0003680
Mepo4g02997 193 PIRSF ESCAROLA 1 193 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02997 Mepo-Chr4 39078521 39080048 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02997 1 193 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 62.564 9.23e-67 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02997 - - ming:122077451 241.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02997 4 39078521 39080048 Mepo4g02997 4 39078521 39080048 ECH