Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02996 ATGGTAAAAACAGTAGTATTTGTGCTGTTGATTGCCTCTATCCTCTTGTGTGTATCTGCCACAACAGATAATGAATTTCCTAGATGTAATTGCGACGATGAGACCAGTTTCTGGACTATTGAGAGTATTTTGGAGTGTCAAAGAGTTGGTGATTTCTTGATTGCTGTGGCCTACTTCTCAATCCCTCTTGAGTTGCTTTATTTCGTCAGTTGCTCGAATGTCCCTTTCAAATGGGTCCTTGTTCAGTTCATTGCTTTTATAGTACTATGTGGATTGACACATTTTCTAAATGGTTGGACTTATGGTCCTCACACCTTTCAGCTTATGGTGGCACTTACCATCTTTAAGATTCTCACTGCCTTGGTGTCTTGTGCAACTGCGATAACGCTTGTCACTTTGATTCCTTTGCTTCTCAAAGTGAAGGTCAGGGAATTCATGCTCAAGAAAAAGACATGGGATCTTGGACGGGAGGTTGGTCTTATTATGAAGCAAAAGGAGGCTGCAATGCATGTAAGAATGCTTACTCAAGAGATTCGGAAATCCCTCGATAGACATACTATTCTGTATACTACTTTGGTGGAGCTTTCAAAAACATTAGGTTTGCAAAATTGTGCCGTGTGGATGCCAAATGAAGAAAAGACAGTGATGAATCTCACTCATGAATTGAACGCAAGGAATTTAGATATTTCTATACTGATTACTGATCCAGATGTTGTAAAAATTAAGGGAAGCAATGGAGTGAATATACTTAGCTCTGAATCAGCACTTGCTGTTTCCAGTCTTGGTGTTTCTGGTGACGCAGGACCGGTTGCTGCAATTCGAATGCCAATGTTACGTGTTTGTAATTTTAAAGGAGGAACACCTGAGCTAACTCAGGCTTGTTATGCAATATTGGTCTTGATTCTTCCGGCCGAAGAACCTAGATCTTGGAGCAATCAGGAGCTGGAGATAATTAAGGTGGTTGCTGATCAGGTTGCCGTGGCTTTATCGCATGCTGCAATTCTTGAAGAGTCTCAACTTATGAGAGAGAAGTTGGAAGAGCGCAATCGAGCTTTGCAACTGGCGAGAAGGAATGCTATGATGGCAAGCCAGGCAAGAAACTCATTTCAGAAAGTCATGAGTGATGGTATGCGGAGGCCTATGCACTCGATTTTGGGATTGCTTTCAATGATACAAGACGATAATTTAAAGAATGAACAGAAGCTTATTGTGGATGCAATGTTAAAGACGAGCAATGTCCTATCAAACTTGATAAATGATGCCATGGACAGCTCTGCAAAGGATGATGGAAGATTTCCTTTGGAGATAAGATCTTTTGGGTTACATTCCATGATAAAAGAAGCAGCGTGCCTTGCCAAATGCATGTGTGTTTATAAGGGCTTGGGTTTTGTGGTTGAGGTTGATAAGTCTTTACCAAACCATGTTATGGGTGATGAGAGGAGGGTTTTTCAGGTGATTTTGCATATGGTTGGGAATCTACTGGATTGTAACCATGGGGAAGGGGGGATCCTAGTATTTCGGGTTTCGGCAGACGCTGGAAGTCAAGGGAGGAATGAAAAAGGATGGGCAACCTGGAGACCAAGCTCATCTAGCGGTGATGTAAATATTAGATTTGAGATAGGGATCAACAGTAGTGATTCTGAAGTTGGGAGCTCAGTGTCCTCAGGTCCTGGGGGTCGGGCATATACGAGTGATAGATATGAGGGCAGATTGAGCTTTAGTATTTGCAAGAGGATAGTCCAGTTGATGCAAGGAAACTTATGGTTGGTTCCATATACTCACGGTATTCCTCAAAGCATGACACTTCTTCTTCGGTTTCAATTACGGCCTTCCATTGCAATAGCCATCTCTGAACCCGGAGAATCTTCAGAACGCAACTATTCCAATTCATTGTTGAGAGGTCTGCAAGTTCTGTTGGTTGACAACGATGATGTAAATAGAGCAGTGACACAAAAATTGCTTCAGAAACTAGGTTGCTCCGTGACTTCCGCTTCTACGGGATTTGAATGCCTTACTGTCATTGGACCTGTCGGATCTTCCATTCAAGTCATTCTTTTGGATCTCCAAATGCCGGATATTGATGGATTTGAAGTAGCCGCAAGGATTCGGAAGTTTAAAAGCGGAAATAGGCCTATAATTGTTGCCTTGACTGCAAGCGCAGAAGAAGATTTGTGGGAAAAGTGTATGCAGATTGGTGTTAATGGAGTAATCCGAAAACCAGTTTTGATGCAAGGAATTGCTAGTGAACTCAGAAGAATTCTGATGCAGGGAAATCTTTGA 2280 0.4211 MVKTVVFVLLIASILLCVSATTDNEFPRCNCDDETSFWTIESILECQRVGDFLIAVAYFSIPLELLYFVSCSNVPFKWVLVQFIAFIVLCGLTHFLNGWTYGPHTFQLMVALTIFKILTALVSCATAITLVTLIPLLLKVKVREFMLKKKTWDLGREVGLIMKQKEAAMHVRMLTQEIRKSLDRHTILYTTLVELSKTLGLQNCAVWMPNEEKTVMNLTHELNARNLDISILITDPDVVKIKGSNGVNILSSESALAVSSLGVSGDAGPVAAIRMPMLRVCNFKGGTPELTQACYAILVLILPAEEPRSWSNQELEIIKVVADQVAVALSHAAILEESQLMREKLEERNRALQLARRNAMMASQARNSFQKVMSDGMRRPMHSILGLLSMIQDDNLKNEQKLIVDAMLKTSNVLSNLINDAMDSSAKDDGRFPLEIRSFGLHSMIKEAACLAKCMCVYKGLGFVVEVDKSLPNHVMGDERRVFQVILHMVGNLLDCNHGEGGILVFRVSADAGSQGRNEKGWATWRPSSSSGDVNIRFEIGINSSDSEVGSSVSSGPGGRAYTSDRYEGRLSFSICKRIVQLMQGNLWLVPYTHGIPQSMTLLLRFQLRPSIAIAISEPGESSERNYSNSLLRGLQVLLVDNDDVNRAVTQKLLQKLGCSVTSASTGFECLTVIGPVGSSIQVILLDLQMPDIDGFEVAARIRKFKSGNRPIIVALTASAEEDLWEKCMQIGVNGVIRKPVLMQGIASELRRILMQGNL 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02996 759 SUPERFAMILY GAF domain-like 186 332 - -
Mepo4g02996 759 SMART HisKA_10 365 430 IPR003661 GO:0000155|GO:0007165
Mepo4g02996 759 FunFam Ethylene receptor 4 332 426 - -
Mepo4g02996 759 Gene3D - 170 336 IPR029016 -
Mepo4g02996 759 SMART gaf_1 183 339 IPR003018 GO:0005515
Mepo4g02996 759 Pfam His Kinase A (phospho-acceptor) domain 366 429 IPR003661 GO:0000155|GO:0007165
Mepo4g02996 759 Coils Coil 335 362 - -
Mepo4g02996 759 Pfam GAF domain 183 329 IPR003018 GO:0005515
Mepo4g02996 759 Pfam Response regulator receiver domain 637 746 IPR001789 GO:0000160
Mepo4g02996 759 CDD HisKA 363 425 IPR003661 GO:0000155|GO:0007165
Mepo4g02996 759 Gene3D - 431 607 IPR036890 -
Mepo4g02996 759 Gene3D - 635 758 - -
Mepo4g02996 759 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 430 591 IPR036890 -
Mepo4g02996 759 FunFam Ethylene receptor 633 757 - -
Mepo4g02996 759 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 25 756 - -
Mepo4g02996 759 SUPERFAMILY CheY-like 633 754 IPR011006 -
Mepo4g02996 759 CDD REC_ETR-like 635 750 - -
Mepo4g02996 759 PIRSF Ethylen_sen_hybr_HK 1 759 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Mepo4g02996 759 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 350 431 IPR036097 GO:0000155|GO:0007165
Mepo4g02996 759 SMART REC_2 635 754 IPR001789 GO:0000160
Mepo4g02996 759 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 477 593 IPR003594 -
Mepo4g02996 759 CDD HATPase_ETR2_ERS2-EIN4-like 471 604 - -
Mepo4g02996 759 Gene3D - 337 430 - -
Mepo4g02996 759 ProSiteProfiles Response regulatory domain profile. 636 754 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02996 Mepo-Chr4 39061647 39065924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02996 23 754 Miscellaneous Gene Families AT3G04580 58.043 0.0 828
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo4g02996 GAF 9.9e-12 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02996 K14509 - gmx:100787425 1259.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02996 4 39061647 39065924 Mepo4g02996 4 39061647 39065924 ECH