Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02980 ATGAATATTACTAAAAACGCACTTGCTATACATTTGATTCAACCTTGTTTGATTGTTATTTTTGCTAACTTACGTTTTTCTTATTTTCACTCAGATCTTGTTAATGCATTAGATCCATTGAATGGTGAAGCTGCTTCCTTGATGATGCGAGATTGTGCTGCATATGAACAAAAAGTTAAAGGTCCTTATCAAGGTGTCTGGAAGTCTCCTTGTTTATCCTTCAATGAAATTCTACAGCAGCACCAGTTAGTACCATCACCGCCACCATCAATTATCAATAATTTTCAGGAGAATTGTAGTAGTGGCAATGTGAGGCCTGTGCCGGTCATGCTCGGTGAGGGTCAATTGCTTGATTTATATCAATTGTTCGCCCTTGTGAAGGAAAAAGGTGGGTATGATGTGGTATCGAGAAAAGGGTTGTGGAATTCTGTGATAGTTGAACTGGGTTTGGACCTTCGTATTCTAGCTTCGGTGAAATTAGTTTTTGACAAATATCTGAATGATTTCGAAGGTTGGCTCAGGAAATCTTTCGAAGAGAAGAGTTTAAAAAATTGGAATGATGGGTATTTGAACTCATTGCCAATAGATCTAGAAAAAGAGTTTCAAAACCTTTTTTGCTCAAATCTAAAGGACAAAGATGATGATTTTGTCCCGTTAGAATCGAATAACATCATAAAGCACATTGATTTGGTTAACCAGAAGAGTGATGGTTATTTATCGGACACTAAAAACCAAAATAACAAATGTGACAGTGTCCAAAATGTTAACAGTGATGGTAATGGCGGCGACGATGAAAAATTGGGCACTGGTGTTAAGGATGATATAACCGCCTCTTATGCGGAAACTGAAAAGGAATTTAATTCTCGCAAACGTAATCGGGAATCGCCTGTAGCTCAACCATTAACAGAACCATCAAAGGGGAAGGAGTATAAAGGAGACCAGGATATTTTTGTTCAGATGCCGAGGGCACGGGATCTTCTGTCGGTCAGAAAGCATGAAGAACCAAACCGTGGATCATCATCCAAGAAGGTGAAGATGAATCCTGCCAAGTATGAGGATCTGAGACGAAGTAAAAGGCTGGCTGTCTCTCTTAAGTTGCACGGTATGGAATCAGAAAAAAGTCCTATGGAGAAAACAAGTGGCAAACCAGATGTCATGATCAAGAAGAAAAAATCAACTTCCAAAGCAGCTGTGACAAAAAAGATAATATCAACTGCCAAAGCAGCTGTGACTGAAGAGAAAAAATATGACCCATTTAGTGATGATTCTCGTGATGTTTCTGTTGGTCCTCTTTTCCAAGTGGAAGTCCCGCAATGGACTGGTGTAGTTTATGGGAGTGACTCTAAATCGTTAGGCACACAAGTATGGCCTGTTAAAGATGATTCAAGACCTACTACAGAAACAGATCTTGTTGGTAGAGGAAGACGAGGAAAGTGTAGCTGCAATGTTCAAGGTTCAGTTGACTGTGTAAGATCTCATATTGCTGCAAACAGGATGAAGCTGAAGTTTGAATTGGGTTCTGCATTTTACCATTGGGGATTTGATAAAATGGGCGAGGAAGTTTCACTTCAATGGACAGGTGATGAAGAAAAGAGATTTAAGGATATAATGAGTCTAAAAATCCCCTCCCAAAACAAGTCTTTTTGGAACAATCCATCCAGTTACTTTCAAAAGAGGACAAGAAAAGACATGGTGAGTTATTACTTCAATGTATATCTTATTCAACTAAGAAGTTATCAGAATCGAGTGACTTCGGAGACTGTTGACAGCGATGATGACGAAATTGAATTTGAATCTTTTGGTGATGGTTTCGGGAGGAAAGCTATCAAGCGTCCATCAACTGAATTCAAGGAGTGTTCAGAGAACAAGTAA 1872 0.3905 MNITKNALAIHLIQPCLIVIFANLRFSYFHSDLVNALDPLNGEAASLMMRDCAAYEQKVKGPYQGVWKSPCLSFNEILQQHQLVPSPPPSIINNFQENCSSGNVRPVPVMLGEGQLLDLYQLFALVKEKGGYDVVSRKGLWNSVIVELGLDLRILASVKLVFDKYLNDFEGWLRKSFEEKSLKNWNDGYLNSLPIDLEKEFQNLFCSNLKDKDDDFVPLESNNIIKHIDLVNQKSDGYLSDTKNQNNKCDSVQNVNSDGNGGDDEKLGTGVKDDITASYAETEKEFNSRKRNRESPVAQPLTEPSKGKEYKGDQDIFVQMPRARDLLSVRKHEEPNRGSSSKKVKMNPAKYEDLRRSKRLAVSLKLHGMESEKSPMEKTSGKPDVMIKKKKSTSKAAVTKKIISTAKAAVTEEKKYDPFSDDSRDVSVGPLFQVEVPQWTGVVYGSDSKSLGTQVWPVKDDSRPTTETDLVGRGRRGKCSCNVQGSVDCVRSHIAANRMKLKFELGSAFYHWGFDKMGEEVSLQWTGDEEKRFKDIMSLKIPSQNKSFWNNPSSYFQKRTRKDMVSYYFNVYLIQLRSYQNRVTSETVDSDDDEIEFESFGDGFGRKAIKRPSTEFKECSENK 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02980 623 CDD ARID 100 170 - -
Mepo4g02980 623 ProSiteProfiles ARID domain profile. 82 174 IPR001606 GO:0003677
Mepo4g02980 623 MobiDBLite consensus disorder prediction 329 351 - -
Mepo4g02980 623 SUPERFAMILY ARID-like 97 175 IPR036431 GO:0003677
Mepo4g02980 623 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 98 622 - -
Mepo4g02980 623 MobiDBLite consensus disorder prediction 368 389 - -
Mepo4g02980 623 SMART ARID_2 82 170 - -
Mepo4g02980 623 Gene3D - 92 186 IPR036431 GO:0003677
Mepo4g02980 623 Pfam ARID/BRIGHT DNA binding domain 102 170 IPR001606 GO:0003677
Mepo4g02980 623 MobiDBLite consensus disorder prediction 239 314 - -
Mepo4g02980 623 MobiDBLite consensus disorder prediction 265 292 - -
Mepo4g02980 623 SMART bright_3 89 175 IPR001606 GO:0003677
Mepo4g02980 623 MobiDBLite consensus disorder prediction 239 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02980 Mepo-Chr4 38913363 38919624 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mepo4g02980 ARID 4.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02980 - - mtr:25484375 974.541