Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02978 ATGTTGGAGGACCTTTTTGATCAGTCACTGCCTTCAAATTTAAAGGCAGATCAACACCAACAAGATCACCAACAACAGCACCAGCAGCAACAGCAACAACAACTTTCCATTGATGAAATTTCAAGCCCTCTTAGCGCTCGAATTTTCGAACTTTGTAACACTGAATTATTCCCAGAAGCTTTGCAGAATTCTGAGGTTACATCAAGCTCAAATTGTTGCTATGAAGAGAATTCCTCATATGCAACAAATATATTAGATGTAGAAAACAAGTTCAATAATAGCAATAGCAATAGCAATAACACAGTGGTCACAACTCCAACTAGCACAAACAACAACATCAACAACAATAATTCCAACAATAGCAATAATCTATCAGTTATCTTTGATTCACAAGAAGAAATTGACAATGACATTTCTGCCTCAATAGATTTCTCACTATCACCATCTTTCAATGTTCCTTCATTCCTTCCAGTCACATCATCACAGCAAGTAGAACAATTTGATTTCTCTTCCGTGCAGCCTCATCATGTTCAACTTACAGCATGTTCATCGGTTGATGGGTTTTCGCAGTATCATAATCCAAATGATTCAGTTGCACCTCTTATGGGAGCTCCTTTATCATTACCACCTGTTTTTGAAGAGGATTGCATTACTTCTGTACCTTCTTATATTCCTTTGAACCCTTCTTCTCCTTCTTGCAATTATCTTGGTCCTGCCGGCATGGCGGCATACATGCCTAATGGTTCTCTTACTACTGCTTTGTCTACTGATAGTTCTGGTTTGTTTGGTGGAAATATGGTTTTTGGTTCTGAAATTCAGACACAAGAACTTGATTATCAAGGAGATAATGGTAGAATTTATTGTCCTGATCCTATTCAGAGGGTGTTTAACCCTCCTGGCCTTCAGGCACTTAATCCTGAGAATCAACAACTAGTAGCTGGTGCTGGTAGTTCTGCCACTCTGACACCAGAAATCTCAAACTTGGAGGACTCCACTTTCAAGGTTGGAAAACTTTCTGTTGAACAAAGGAAAGAAAAGATTCACAGATACATGAAGAAAAGAAATGAAAGAAACTTCAGCAAGAAAATTAAGTATGCATGCCGCAAAACTCTGGCCGATAGCAGACCTCGAGTTAGAGGAAGATTTGCAAAGAATGATGATTTTGGAGATACGAATAGAACTGCTAGTGGCAATCATGAAGAAGAAGATGAAGAAGAGGTAGTTGTGAAAGAGGAAGATGATATGGTTGATTCCTCAGATATATTTGCTCATATCAGTGGAGTGAACTCCTTCAAATGCAACTATTCCATTCAATCATGGATTTGA 1326 0.3846 MLEDLFDQSLPSNLKADQHQQDHQQQHQQQQQQQLSIDEISSPLSARIFELCNTELFPEALQNSEVTSSSNCCYEENSSYATNILDVENKFNNSNSNSNNTVVTTPTSTNNNINNNNSNNSNNLSVIFDSQEEIDNDISASIDFSLSPSFNVPSFLPVTSSQQVEQFDFSSVQPHHVQLTACSSVDGFSQYHNPNDSVAPLMGAPLSLPPVFEEDCITSVPSYIPLNPSSPSCNYLGPAGMAAYMPNGSLTTALSTDSSGLFGGNMVFGSEIQTQELDYQGDNGRIYCPDPIQRVFNPPGLQALNPENQQLVAGAGSSATLTPEISNLEDSTFKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGDTNRTASGNHEEEDEEEVVVKEEDDMVDSSDIFAHISGVNSFKCNYSIQSWI 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02978 441 MobiDBLite consensus disorder prediction 381 409 - -
Mepo4g02978 441 MobiDBLite consensus disorder prediction 14 36 - -
Mepo4g02978 441 MobiDBLite consensus disorder prediction 381 400 - -
Mepo4g02978 441 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 17 406 IPR045281 GO:0009909
Mepo4g02978 441 Pfam CCT motif 343 385 IPR010402 GO:0005515
Mepo4g02978 441 ProSiteProfiles CCT domain profile. 343 385 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02978 Mepo-Chr4 38845781 38849531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02978 323 392 C2C2-CO-like Transcription Factor Family AT5G24930 40.000 2.16e-11 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo4g02978 CCT 5.9e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02978 - - aprc:113871720 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02978 4 38845781 38849531 Mepo4g02978 4 38845781 38849531 ECH