Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02969 ATGGATCCCAAAACCGGCTTCAATTCCATTTCCAAAACCTTCCACAGTCTAAGACCTCCACTCAACCTTCCTCCACCACACGCCAATATCTCCGCCGCAACATACACCTTCTCCCTCCACCACTCCGACTCAAACACTTTCCTCATCGACTCAACCACCTCTCACAAACTCTCTTACTCCACTTTCATCCAACGCTACAAAACCCTCGCTAAAAACCTCACTCTCCGCGGACTCACCAAACACCACACCGCATTGATTCTTTCCCCAAACCTCCTCCAGGTTCCAATCCTCTACTTCGCATTACTCTCCATTGGCGTGGTCGTTTCACCAACAAACCCAATTTCCACTCCCTCAGAAATCTCTCATCTCGTAAACCTCTCTAAACCCGTTATCGCTTTTACGACGTCGTTTTTATCTCACAAACTTCCCAAACTCGCTTTTGGAACGATTCTCATCGACTCTCCCGAGTTCGACTCACTCACCACCGAAGCAGATGCTAGTTCGACGGTGTCGCCGCCGGAGGTCAGTCAATCCGACGTGGCGGTCATTCTGTACTCGTCAGGAACCACCGGGAAATCGAAAGGGGTGATGCTTACTCACCGGAACTTGATGGCAACGGTGGCGGCATACAATGCCGTTAGGATTCCGACGGCCAGTCCTGCAGTGTGTTTGTTAACAGTGCCGTGTTTTCATGTGTACGGTTTTACGTACCTTTTGAAGGGTGTGGCTATGATGGAAACAATGGTGATGATGAAAAGGTTTGAATTGGGGAAAATGCTGGGTGCTGTGGAGAGGTTTAGAGTGACTAATGTTGCGGTGGCGCCACCAGTGGTGGTGGCGATGAGTAAAGAGGGAGTGGCGGATGGGTATGATTTATGGTCGTTGAAAACAGTTGCTTGTGGTGGTGCTCCGTTGGGAAAGGATAACTTTGTTGCTTTCATGGCAAAGTTCCCTCATGTATCGATTATTCAGGGATATGGTTTAACTGAATCAACAGCCGGTGTTATCCGAATAGTAGGTCCTGAGGAGGCTAGCCGGGGAGGAACTACAGGGAAGCTGGTATCAGGGATGGAAGCTAAAATAGTGAACCCAAACACAGGAGAGGCCATGTCTCCTGGTGAACAAGGGGAACTTTGGGTTAGAGGACCTCCAATTATGAAAGGTTATGTTGGTGATCCAGTGGCAACTTCTGTTACTTTAGTGGATGGATGGTTGAGAACCGGGGATATTTGCTATTTTGACAATGAAGGCTTCGTGTATGTTGTAGACAGGCTGAAAGAATTGATCAAATATAAAGGCTACCAGGTGGCTCCTGCAGAGCTGGAACAATTGCTCCAATCTCACCCAGAGATAAAAGATGCTGCAGTTATCCCATACCCTGATGAGGATGCTGGCCAGATTCCCCTAGCTTTTGTGATAAGGCAGCCTCACAGCTCCATGGGTGAAGCCGAAATAATAAATTTTGTAGCCAAACAGGTTGCACCATACAAGAAGGTAAGGCGTGTGGTATTTGTCAATTCTATACCAAAGAATGCAACAGGAAAAATACTGAGGAAGGACTTGTTGAATAAAATTCTTCTCCAACGAACTTTCCCTAGGTTATAA 1605 0.4741 MDPKTGFNSISKTFHSLRPPLNLPPPHANISAATYTFSLHHSDSNTFLIDSTTSHKLSYSTFIQRYKTLAKNLTLRGLTKHHTALILSPNLLQVPILYFALLSIGVVVSPTNPISTPSEISHLVNLSKPVIAFTTSFLSHKLPKLAFGTILIDSPEFDSLTTEADASSTVSPPEVSQSDVAVILYSSGTTGKSKGVMLTHRNLMATVAAYNAVRIPTASPAVCLLTVPCFHVYGFTYLLKGVAMMETMVMMKRFELGKMLGAVERFRVTNVAVAPPVVVAMSKEGVADGYDLWSLKTVACGGAPLGKDNFVAFMAKFPHVSIIQGYGLTESTAGVIRIVGPEEASRGGTTGKLVSGMEAKIVNPNTGEAMSPGEQGELWVRGPPIMKGYVGDPVATSVTLVDGWLRTGDICYFDNEGFVYVVDRLKELIKYKGYQVAPAELEQLLQSHPEIKDAAVIPYPDEDAGQIPLAFVIRQPHSSMGEAEIINFVAKQVAPYKKVRRVVFVNSIPKNATGKILRKDLLNKILLQRTFPRL 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02969 534 ProSitePatterns Putative AMP-binding domain signature. 183 194 IPR020845 -
Mepo4g02969 534 CDD 4CL 27 521 - -
Mepo4g02969 534 FunFam 4-coumarate--CoA ligase 2 427 528 - -
Mepo4g02969 534 Gene3D - 16 426 IPR042099 -
Mepo4g02969 534 Pfam AMP-binding enzyme C-terminal domain 440 515 IPR025110 -
Mepo4g02969 534 Pfam AMP-binding enzyme 45 431 IPR000873 -
Mepo4g02969 534 Gene3D - 427 526 IPR045851 -
Mepo4g02969 534 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 523 - -
Mepo4g02969 534 SUPERFAMILY Acetyl-CoA synthetase-like 36 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02969 Mepo-Chr4 38750845 38758040 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02969 1 521 Monolignol Biosynthesis Gene Families AT5G63380 51.017 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02969 K01904 - gmx:100801143 666.381