Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02968 ATGTATTCAGGAATGATGGAAGGAAACACAGGATGGAGTGTAATAGAAGAAGATAGATGGAGGAAAGGACCTTGGACTTCTGATGAAGACAAGTTACTCATTGAGTATGTCAAGCTGCATGGTGAAGGAAGATGGAACTCTGTCTCTAGGCTTGCAGGACTGAGAAGAAATGGGAAAAGTTGTAGATTGAGATGGGTTAACTACCTAAGACCAGACCTTAAAAAGGGTCAGATAACACAACAAGAAGAAAGCATAATCCTAGAGCTACATGCTAGGTGGGGAAACAGGTGGTCAACAATTGCGAGAAGCTTGCCGGGAAGAACAGACAATGAGATAAAGAACTATTGGAGGACTCATTTCAAGAAAAAGAACAAAAACCCCTCTGATGCTGCTGAAAAGGCGAAAAATCGTTCTTTCAAGAGGCAGCAACAACAACAATTGAAGAAACAACAGCAACAAGTTCAGATGCAGCAACAACAACTACAATACAACATGGATATGAAAGGGATCATAGACTTGTTGCTTGAGGAAAATGACTACGGTACTAGTGTGCCTTCTACTTCTCAAGAGACACAAGAAATGGTTTCCATTTATGCACATACGCAAGAACAACAGGGTTGCTTTTACTCTATGCTCAATGATAATAATAGTAATGTCTATGCACAAGAGTCTTCAAATGAAGAAATTTTGTGGGATGGACTTTGGAACTTGGATGATGTTCTTGGAAATTCAATGCAGCTAATGCTACAAGCAAAGCCAGCCAATGTACACAATGTAGTTACTCCCTTTTGTTAA 795 0.3987 MYSGMMEGNTGWSVIEEDRWRKGPWTSDEDKLLIEYVKLHGEGRWNSVSRLAGLRRNGKSCRLRWVNYLRPDLKKGQITQQEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKNKNPSDAAEKAKNRSFKRQQQQQLKKQQQQVQMQQQQLQYNMDMKGIIDLLLEENDYGTSVPSTSQETQEMVSIYAHTQEQQGCFYSMLNDNNSNVYAQESSNEEILWDGLWNLDDVLGNSMQLMLQAKPANVHNVVTPFC 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02968 264 FunFam Myb transcription factor 22 74 - -
Mepo4g02968 264 SUPERFAMILY Homeodomain-like 19 116 IPR009057 -
Mepo4g02968 264 MobiDBLite consensus disorder prediction 122 153 - -
Mepo4g02968 264 CDD SANT 24 69 IPR001005 -
Mepo4g02968 264 Pfam Myb-like DNA-binding domain 22 69 IPR001005 -
Mepo4g02968 264 Pfam Myb-like DNA-binding domain 75 119 IPR001005 -
Mepo4g02968 264 Gene3D - 79 123 - -
Mepo4g02968 264 MobiDBLite consensus disorder prediction 122 139 - -
Mepo4g02968 264 Coils Coil 140 160 - -
Mepo4g02968 264 Gene3D - 22 74 - -
Mepo4g02968 264 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Mepo4g02968 264 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 16 236 IPR044676 GO:0003700|GO:0006355|GO:0043565
Mepo4g02968 264 SMART sant 21 71 IPR001005 -
Mepo4g02968 264 SMART sant 74 122 IPR001005 -
Mepo4g02968 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 124 IPR017930 -
Mepo4g02968 264 CDD SANT 79 120 IPR001005 -
Mepo4g02968 264 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Mepo4g02968 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 73 IPR017930 -
Mepo4g02968 264 FunFam MYB-related transcription factor 79 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02968 Mepo-Chr4 38738077 38739380 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02968 17 264 MYB Transcription Factor Family AT4G13480 50.562 2.34e-82 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo4g02968 Myb_DNA-binding 2.8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02968 K09422 - gmx:100782089 360.918