Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02962 ATGGAGCAGGAAGAGCATGAAGTCTATGGTGCTGACATTCCCGATGAAGAGGTTGACATGGATGCCGACATAGATGCTGAACATCAAGAAGGCGATGAAGAACTCGCATCCAATCACACCACCAAGGAATTGGAGGATATGAAGAAGAGGCTGAAAGAGATCGAGGAAGAAGCTAGTGCCCTTCGCGAAATGCAAGCTAAGGTTGAGAAAGAGATGGGCGCTGTTCAAGATCCTGCTGGGTCTTCTGTATCTCAAGCTGAAAAGGAGGAAGTGGATGCTCGTTCGATCTATGTCGGTAATGTTGACTATGCATGCACACCTGAAGAAGTCCAACAGCATTTTCAGTCCTGTGGTACTGTGAACAGAGTCACAATATTGACAGACAAATTTGGTCAACCGAAAGGATTTGCTTATGTAGAATTTGTTGAAGCTGATGCTGTTCAGAATGCTCTCATTTTAAATGAAACTGAATTGCATGGCCGACAGCTGAAGGTGTCTGCAAAACGTACAAATGTTCCTGGTTTGAAGCAGTACGGAAGAAGACCTGCTGGTTTCCGCGGTAGGAGGCCTTTCATGCCTGCACCATTTTTTCCACCATATGCTTACGGAAGGGTTCCGAGATATAGAAGACCCACCCGATACCGGCCATACTAG 654 0.4618 MEQEEHEVYGADIPDEEVDMDADIDAEHQEGDEELASNHTTKELEDMKKRLKEIEEEASALREMQAKVEKEMGAVQDPAGSSVSQAEKEEVDARSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEADAVQNALILNETELHGRQLKVSAKRTNVPGLKQYGRRPAGFRGRRPFMPAPFFPPYAYGRVPRYRRPTRYRPY 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02962 217 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 94 170 IPR000504 GO:0003723
Mepo4g02962 217 SUPERFAMILY RNA-binding domain, RBD 84 190 IPR035979 GO:0003676
Mepo4g02962 217 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 25 192 - -
Mepo4g02962 217 MobiDBLite consensus disorder prediction 1 48 - -
Mepo4g02962 217 CDD RRM_II_PABPs 95 166 - -
Mepo4g02962 217 Coils Coil 37 71 - -
Mepo4g02962 217 SMART rrm1_1 95 166 IPR000504 GO:0003723
Mepo4g02962 217 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 96 164 IPR000504 GO:0003723
Mepo4g02962 217 MobiDBLite consensus disorder prediction 1 30 - -
Mepo4g02962 217 MobiDBLite consensus disorder prediction 31 48 - -
Mepo4g02962 217 Gene3D - 12 174 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02962 Mepo-Chr4 38706264 38711012 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02962 95 166 Eukaryotic Initiation Factors Gene Family AT2G36660 35.616 1.71e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02962 K14396 - gmx:100527139 334.724