Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02945 ATGTGCAACTTGTCTGCTGTGCTATGCCATATTTTTTTCTCTATTTTGAAGGCATTGCTTCATGTTATATATTGGGACTCGCTGCCTGACATGCAAGAGCTTACTGGGATTAACTCAAAATGGGCAACTACCTTGATGGCTCAGCATCTGCTAGCAGCAGCTGATCGGTATGCCTTAGATAGACTTAGGCTGATGTGTGAAGCAAGTCTATGTGAAGATGTTGCAATAAATACTGTGGCTACAACTTTAGCTTTGGCAGAGCAGCACCATTGTTTCCAGTTGAAAGCAGTCTGTTTGAAATTCATTGCAAGGCCTGAAAATCTCAGAGCTGTGATGCAAACTGATGGTTTCGAGTACTTGAAGGAAAGTTGCCCATCTGTTTTGACTGAGCTTTTGGAGTATGTGGCTAGATTTACTGAGCATTCGGACTTCCTGTGCAAGCATAGGAATGAAGCAATACTTGATGGCAGTGATGTAAATGGAAGGCGGGTGAAGCAAAGACTATACTGTGAAAAATGA 519 0.4239 MCNLSAVLCHIFFSILKALLHVIYWDSLPDMQELTGINSKWATTLMAQHLLAAADRYALDRLRLMCEASLCEDVAINTVATTLALAEQHHCFQLKAVCLKFIARPENLRAVMQTDGFEYLKESCPSVLTELLEYVARFTEHSDFLCKHRNEAILDGSDVNGRRVKQRLYCEK 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02945 172 Gene3D - 74 151 - -
Mepo4g02945 172 Gene3D Potassium Channel Kv1.1; Chain A 5 68 IPR011333 -
Mepo4g02945 172 FunFam BTB-POZ and math domain 1 74 151 - -
Mepo4g02945 172 Pfam BTB/POZ domain 8 72 IPR000210 GO:0005515
Mepo4g02945 172 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 15 132 IPR045005 GO:0016567
Mepo4g02945 172 SUPERFAMILY POZ domain 10 73 IPR011333 -
Mepo4g02945 172 CDD BACK_AtBPM-like 71 134 IPR034090 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02945 Mepo-Chr4 38520324 38521284 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mepo4g02945 BTB 7.9e-06 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02945 K10523 - gmx:100799666 292.737