Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02938 ATGAGCATCTCATTGTCCATGTGCAGACTAATTAGACAACCCTTAACAAGCAATGTTCAATGCAGTGGCAAAAAACTGAACATGAGACAAATTCAAAAAGAAAATGTAGTGTTGGTGATGGGAGCAACAGGAGCTGGAAAGTCAAAGCTTTCAATTGACTTAGCCAATTATTTCCCATCAGAAATAATCAACTCAGACAAAATTCAAATATACGAAGGTCTCGACATAGTAACAAACAAAATCACACTTGAAGAACAAAAAGGAATACCTCACCATATACTAGGAACACATAACCCCAGCATAGAGTTCACGTCGAATGATTTTCGCGAAAAATCAACCTCAGCCATTGATTCAATCACGAGCGGTGGAAATCTTCCGATCATCGTTGGTGGCTCTAATTCCTACCTCGAAGCCTTAGTTGACGATGATGATTACAATTTTCGATCGAGGTACAATTTTTGTTGCCTTTGGGTGGATGTTTCCATGCCTATTCTTCGTTCCTACATAAACCGACGTGTTGATCAAATGTTAAACAGTGGAATGGTTAATGAGTTGCGACCCTTTTATAATCCGAACGGGGATTACTCAAAAGGGATAAGAAAAGCCATCGGTGTTCCTGAATTCGACGAGTATTTTCGTAGAGAAAGTTATGTCGACGATGATACTAAAAAAATGTTGCTAGAAAAAGCAGTGAGTGAAATGAAGATAAATACATGGAAATTAGCTAAGAAACAACTTCGAAAAATTGATTGGCTTAAGAATGTTAAGAGATGGAACATTCATCAATTAGATGCTACACCTGTTTTTAAGAAGCATGGAAAAGAAGCTGATGAAACATGGAAGAAGATTGTTGCAGAGCCTAGTGCCTATGATTGTGGCACAATTTTTATATAA 894 0.3758 MSISLSMCRLIRQPLTSNVQCSGKKLNMRQIQKENVVLVMGATGAGKSKLSIDLANYFPSEIINSDKIQIYEGLDIVTNKITLEEQKGIPHHILGTHNPSIEFTSNDFREKSTSAIDSITSGGNLPIIVGGSNSYLEALVDDDDYNFRSRYNFCCLWVDVSMPILRSYINRRVDQMLNSGMVNELRPFYNPNGDYSKGIRKAIGVPEFDEYFRRESYVDDDTKKMLLEKAVSEMKINTWKLAKKQLRKIDWLKNVKRWNIHQLDATPVFKKHGKEADETWKKIVAEPSAYDCGTIFI 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02938 297 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 189 IPR027417 -
Mepo4g02938 297 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 162 260 - -
Mepo4g02938 297 FunFam Adenylate isopentenyltransferase 5, chloroplastic 162 260 - -
Mepo4g02938 297 Gene3D - 33 289 IPR027417 -
Mepo4g02938 297 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 33 288 IPR039657 -
Mepo4g02938 297 Pfam IPP transferase 148 247 - -
Mepo4g02938 297 Pfam IPP transferase 69 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02938 Mepo-Chr4 38408724 38410092 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02938 149 289 C2H2 Transcription Factor Family AT2G27760 27.976 8.54e-21 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02938 K10760 - gmx:100803964 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02938 4 38408724 38410092 Mepo4g02938 4 38408724 38410092 ECH