Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02937 ATGGTAGGAGAAAGTAACAACGAAGAGAACAGTTCAGAGCTAGCATCATATGAAGCTGAAGGAACCAGTAACCATGATGTTTCTGAGGAACATCAAATTCAAAACCAACACTTTGGAAGAAGTGGGTTAGAGTGGAATTTCTTACCAAAACTACCTCAAAATAACTATGTTGAATATCTCTCTGAATCCTCAACTTATCTTCCAAACACTACTACAACAACTCAGTATAATATGATTGGGAATAGCCATTATCAAACTCTTGGTGGTAGCAGCAGCAGTTTCAATGATCCTGGAAAAGCTGATTTTGGTTTTAAGCTGATTGATTCTTCAAGTCATGATTTTGGTGTTAGGAAGCGTGTAGGGTTTTGGAGAAGTAATGAAGGAGAGGAAGAAGCTCATAAATTTGAAACTGGAAGTAGTCAAAATCTCCACTATGCTGAGGGTCATGCAACATGGACACCTGATTCAGTTGGAGATAAGCAATATGCTTCACAATTTGATCATATGGGAGTAGTTGCTGCACCTTCTTTACTTCCAAATCCAAAATCAGGAGGCAGCTCCACAAAACAGAAAAGTGAGAAAACACGTTACTCTGACCGTCAACGCAGGCAACGTATCGCTGATAACCTCAAAGCTTTACATGAATTGCTGCCGACTCCACATGTGGGTAGTCAAGCTTACATATTGGATGATATCATTGACTATGTTAAATACTTGCAGATTCAAGTGAAGGAACTAAGTGGAAGTAAATTGCAAGCTGATTCAAATGCTATACCACTAGTTTTCCATGAGGGTTATGGGCATTATATAAAAGAACAGATGTTGAATGAGCCTCTTGAAGAGATAATGGGGAATCTACTTGAAGTAAATTCAGCAGCAACATGTCAGCTACTTGAAAACAAAGGTCTTGTTCTGCTGCCTATTGCTTTGGTTGATGAACTGAACCAAGCTATGCAATGGTTGAACCAAGCTAGCTAG 978 0.3916 MVGESNNEENSSELASYEAEGTSNHDVSEEHQIQNQHFGRSGLEWNFLPKLPQNNYVEYLSESSTYLPNTTTTTQYNMIGNSHYQTLGGSSSSFNDPGKADFGFKLIDSSSHDFGVRKRVGFWRSNEGEEEAHKFETGSSQNLHYAEGHATWTPDSVGDKQYASQFDHMGVVAAPSLLPNPKSGGSSTKQKSEKTRYSDRQRRQRIADNLKALHELLPTPHVGSQAYILDDIIDYVKYLQIQVKELSGSKLQADSNAIPLVFHEGYGHYIKEQMLNEPLEEIMGNLLEVNSAATCQLLENKGLVLLPIALVDELNQAMQWLNQAS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02937 325 MobiDBLite consensus disorder prediction 1 22 - -
Mepo4g02937 325 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 190 239 IPR011598 GO:0046983
Mepo4g02937 325 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 67 310 - -
Mepo4g02937 325 Gene3D - 187 258 IPR036638 GO:0046983
Mepo4g02937 325 SMART finulus 196 245 IPR011598 GO:0046983
Mepo4g02937 325 MobiDBLite consensus disorder prediction 174 202 - -
Mepo4g02937 325 Pfam Helix-loop-helix DNA-binding domain 198 240 IPR011598 GO:0046983
Mepo4g02937 325 CDD bHLH_AtbHLH_like 198 247 IPR045239 -
Mepo4g02937 325 MobiDBLite consensus disorder prediction 1 35 - -
Mepo4g02937 325 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 188 253 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02937 Mepo-Chr4 38400140 38403381 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02937 170 317 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 32.571 2.91e-18 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo4g02937 HLH 4.7e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02937 - - cam:101507064 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02937 4 38400140 38403381 Mepo4g02937 4 38400140 38403381 ECH