Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02930 ATGGCTGCTCCACCTCCTCCACTAGGCAGTAAGCTTCAAAACATGTTGCAGGCTGCGGTGCAATCTGTTCAGTGGACTTATAGCCTCTTCTGGCAACTTTGCCCACAACAACTGATTCTAGTATGGGGTGATGGATATTACAATGGATCAATTAAGACTCGAAAGACAGTGCAACCAATGGAGGTTAGTGCTGAGGAAGCATCTCTACAAAGAAGCCAGCAACTAAGAGAACTCTATGAATCATTGTCTGCCGGAGAGACAAATCCACCAACTCGTCGTCCATGTGCTTCTTTGTCACCTGAGGACCTAACAGAATCTGAATGGTTCTATTTGATGTGTGTCTCTTTCTCTTTTCCTCCTGGTGTAGGGTTGCCAGGAAGGGCATACACAAAGAGACAGCATGTATGGCTCACGGGTGCAAATGAGGTGGATAGCAAAACATTTTCAAGAGCTATTCTAGCTAAGAGTGCTAATATACAGACTGTGGTATGCATTCCTATATTGGACGGTGTCGTTGAGTTTGGCACAACGGATAAGGTTCAAGAAGACCTTAATTTCATCAAACACGTGAAGAGTTTCTTCTTAGACAGTCACTCTTTGCCGTCAAAGCCAGCACTCTCAGAACACTCAACCTCTAACCCAACTTCCTCAACCGATCACATTCCTACCATCATGTACACCATGGCAGACCCACCCTCTACAAATCCCAATCAAGACGACATGGATGAGGACGAGGAAGAAGATGAAGAAGACGATGAAGTCGAATCCGAGTCTGAAGACGAAACAGGAGGTCGTAACCGACATGCAACCTCGATGACGGCTATTGTAGAGCCAAGTGAGTTGATGCAAATTGAAATGCCTGATGATATTCGGATCGGGTCGCCAAACGATGGATCAAATAATTTAGATTCAGATTTTCATTTATTAGTTGTGAGTAATCAAGGAAACCCGTTAGGACACGTGGACTCGTACAAAACCGATTCAACACAAAGGTGGGGCCCAATTGAAGAACCGGTGGGTAATTTGCTACAAGTTCAACTACCATCTTCAGTACTTCATCATCAACTAGAAGACTTAACACAAGAAGACACACACTACTCTCAAACAGTTTCCACCATCCTCCAAAATCAATCAACACAATGGACTATCGATTCTTCACCTTCCATCAACTACATCACTTCCTCTAACCATTCCTCATTCACCAACTGGACCAACCACCAGCACTTCCACCCTTTGCCACCACCGGAAACCACCACCACCACCTCCCAATGCCTCCTCAAATACATCCTCTTCACAGTCCCATACCTCCACACCAAAAACCACGACGAAACCTCCCCTCAAACCCATGATGCAGGCGGTGACCCCTCCTCCAAGTTACGCGGCAAGGGAACATCGCAAGACGAGCTGAGTGCCAACCACGTCCTCGCGGAGCGAAGAAGAAGAGAGAAACTCAATGAGAGGTTCATTATTTTAAGATCATTGGTTCCATTCGTGACGAAAATGGACAAAGCTTCTATATTAGGTGACACTATTGAGTACTTGAAACAGCTAAGAAGAAAGATACAAGATCTTGAAACACGTAACCGTCAGATAGAGACCGAACAACAAAGTAGAAGTGGTGTAACGGTTTTGGTGGGTCCAGCAGAGAAGAAAAAGGTGAGGATTGTGGAAGAGTGTGGAGCCACGAGAGCGAAAGCGGTTGAGACGGAGGTTGTTGCGTCGGTTCAAGTTTCGATTATTGAGAGTGATGCATTGTTGGAGATTGAGTGTTTGCATAGAGAAGGATTGTTGCTTGATGTTATGGTAATGTTGAGGGAGTTGAAGATTGAGGTTATTGGAGTTCAATCTTCCCTTAATAATGGTGTTTTTGTTGCGGAGTTGAGGGCTAAGGTGAAGGAAAATGGTGGAAATGGGAAGAAAGTTAGTATTGTGGAAGTTAAGAGAGCACTTAACCAAATTATACCTCACAACATTTAG 1977 0.4466 MAAPPPPLGSKLQNMLQAAVQSVQWTYSLFWQLCPQQLILVWGDGYYNGSIKTRKTVQPMEVSAEEASLQRSQQLRELYESLSAGETNPPTRRPCASLSPEDLTESEWFYLMCVSFSFPPGVGLPGRAYTKRQHVWLTGANEVDSKTFSRAILAKSANIQTVVCIPILDGVVEFGTTDKVQEDLNFIKHVKSFFLDSHSLPSKPALSEHSTSNPTSSTDHIPTIMYTMADPPSTNPNQDDMDEDEEEDEEDDEVESESEDETGGRNRHATSMTAIVEPSELMQIEMPDDIRIGSPNDGSNNLDSDFHLLVVSNQGNPLGHVDSYKTDSTQRWGPIEEPVGNLLQVQLPSSVLHHQLEDLTQEDTHYSQTVSTILQNQSTQWTIDSSPSINYITSSNHSSFTNWTNHQHFHPLPPPETTTTTSQCLLKYILFTVPYLHTKNHDETSPQTHDAGGDPSSKLRGKGTSQDELSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYLKQLRRKIQDLETRNRQIETEQQSRSGVTVLVGPAEKKKVRIVEECGATRAKAVETEVVASVQVSIIESDALLEIECLHREGLLLDVMVMLRELKIEVIGVQSSLNNGVFVAELRAKVKENGGNGKKVSIVEVKRALNQIIPHNI 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02930 658 SMART finulus 474 523 IPR011598 GO:0046983
Mepo4g02930 658 MobiDBLite consensus disorder prediction 202 270 - -
Mepo4g02930 658 MobiDBLite consensus disorder prediction 203 236 - -
Mepo4g02930 658 MobiDBLite consensus disorder prediction 440 474 - -
Mepo4g02930 658 MobiDBLite consensus disorder prediction 237 259 - -
Mepo4g02930 658 Gene3D - 468 541 IPR036638 GO:0046983
Mepo4g02930 658 Pfam Helix-loop-helix DNA-binding domain 471 518 IPR011598 GO:0046983
Mepo4g02930 658 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 12 194 IPR025610 -
Mepo4g02930 658 PANTHER TRANSCRIPTION FACTOR TT8 2 656 - -
Mepo4g02930 658 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 470 537 IPR036638 GO:0046983
Mepo4g02930 658 Coils Coil 507 534 - -
Mepo4g02930 658 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 468 517 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02930 Mepo-Chr4 38319038 38327326 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02930 353 657 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 39.677 1.26e-54 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo4g02930 bHLH-MYC_N 1.8e-53 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02930 - - cam:101506726 903.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03522 3 45030850 45032390 Mepo4g02930 4 38319038 38327326 PCT