Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02897 ATGGAGCAGTATGAAGTACTAGAACAGATTGGTAAGGGCTCTTTTGCTTCTGCTTTGCTTGTAAGACACAAACATGAAAACAAAAGGTATGTGCTGAAGAAGATCCGTCTTGCCCGGCAGACAGACAGAATCCGTAGATCTGCTCACCAGGAGATGGAACTTATATCTAAAGTTCGTAATCCATTCATTGTTGAGTATAAAGATTCCTGGGTCGAAAAGGGTTGCTTTGTATGTATCGTCATTGGCTATTGTGAAGGAGGAGATATGGCTGAAGCTATTAAAAAGGCGAACTGTGTTCATTTTTCTGAAGAGAGGCTTTGCAAGTGGTTTGTTCAACTCTTGATGGCACTTGATTACTTGCACGCAAATCATATTCTTCACCGTGATGTCAAGTGTTCAAATATATTCTTGACAAAAGATCAAGATATACGTCTAGGTGACTTTGGTCTTGCTAAAATGTTGACAAGTGATGATCTTGCTTCCTCTATTGTTGGCACTCCAAGTTATATGTGCCCAGAGCTTCTTGCTGATATACCCTATGGCTCTAAGTCAGATATCTGGTCTTTGGGATGCTGTGTATATGAAATGGCTGCTTACAAACCAGCTTTTAAAGCTCTCGATATGCAAGCACTAATTAACAAAATAAACAAATCTTTAGTGGCCCCACTACCAACAATGTATTCCGGTACTTTTCGAGGCATGGTGAAGAGCATGCTGCGGAAAAACCCTGAGCTTAGGCCAAGTGCTGCAGAGCTACTAAATCATCCTCATCTTCAACCTTATATACTTAAAGTTCATCTGAAGCTAAATAACCCCAGAAGAAGTACTTTCCCTTTCCAATGGACTGACTCAAACCATGCTAGGAGAAGTCGATTTTTAGAACGAGAATCTGTTTCCACTATCTCAGGCAGAGCTAAACGATTGTCATTCAGTAACGATAGGGCCTTGAATCCTAGTATTTCTGGAACTGAAGTAGGTTCTCTGTGTTCTTCTCAAAGAGCACAAGGATTCTCTACTTGTTCAAAACATTATGAACTATCCATAGGTTGTGTCCGTGAAGAACGCAATGCTAACAATTTGAAAGATGCCAAGTTTTCAATTGTTGATCAGATGCAAAGACTGGGCGCAGGTAAGGAGTCGGTCATCCCACGGCGACAGACAACACCATCAAAGATAACCTATACTAGCTCTAAGCGTGACTCACTTCCATCATCTTCTATTCCAGCTAGTAAATTTACTCCACCATCTCGCAGAGCTTCCCTTCCACTTCCTACAAGATCCAAGGCCACGACTACGCCTTACAGAGCCAATGTTGGTCCTCTTCATAGTGTGGACTCTCCTGATATTTCTGTTAATGCGCCACGAATTGACAAGATTGCTGAGTTCTCTTTGGCCCCGGGTGAGGATCATCCTCTCTTCCCTGTGCGCGGAACATCATCAACATCAGCTCAGTGCTCTTCTAGTTCCCCAAGGAGCGCTGCTGCTGACCACTCAATCACAAAGGACAAGTGTACAATTCAGGTTATGGACAAAGCCAGTGTCCCTACAAGTGCTGCTCTACAACATGTGGCAACTGCTGTTTCCAGCCATTCCTCAGCCGATTCTCATCAGCACAAGTTTGACACCTCGTCTTACCAGCAACGAGCAGAGGCATTGGAAGGGTTGCTCGAGTTCAGTGCTCGACTTCTACAACAACAGAGGTTTGAAGAGCTTGAGGTGTTGTTGAAACCGTTCGGGCCAGAGAAGGTTTCTCCAAGAGAAACAGCCATTTGGTTGACCAAGAGCTTCAAAGAAACTGTTGTCTAA 1806 0.4352 MEQYEVLEQIGKGSFASALLVRHKHENKRYVLKKIRLARQTDRIRRSAHQEMELISKVRNPFIVEYKDSWVEKGCFVCIVIGYCEGGDMAEAIKKANCVHFSEERLCKWFVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKMLTSDDLASSIVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMAAYKPAFKALDMQALINKINKSLVAPLPTMYSGTFRGMVKSMLRKNPELRPSAAELLNHPHLQPYILKVHLKLNNPRRSTFPFQWTDSNHARRSRFLERESVSTISGRAKRLSFSNDRALNPSISGTEVGSLCSSQRAQGFSTCSKHYELSIGCVREERNANNLKDAKFSIVDQMQRLGAGKESVIPRRQTTPSKITYTSSKRDSLPSSSIPASKFTPPSRRASLPLPTRSKATTTPYRANVGPLHSVDSPDISVNAPRIDKIAEFSLAPGEDHPLFPVRGTSSTSAQCSSSSPRSAAADHSITKDKCTIQVMDKASVPTSAALQHVATAVSSHSSADSHQHKFDTSSYQQRAEALEGLLEFSARLLQQQRFEELEVLLKPFGPEKVSPRETAIWLTKSFKETVV 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02897 601 FunFam Serine/threonine-protein kinase Nek2 1 83 - -
Mepo4g02897 601 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Mepo4g02897 601 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g02897 601 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Mepo4g02897 601 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Mepo4g02897 601 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g02897 601 MobiDBLite consensus disorder prediction 477 495 - -
Mepo4g02897 601 Gene3D Transferase(Phosphotransferase) domain 1 84 273 - -
Mepo4g02897 601 MobiDBLite consensus disorder prediction 376 441 - -
Mepo4g02897 601 FunFam Serine/threonine-protein kinase Nek3 86 332 - -
Mepo4g02897 601 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g02897 601 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 557 - -
Mepo4g02897 601 MobiDBLite consensus disorder prediction 423 437 - -
Mepo4g02897 601 CDD STKc_Nek 3 258 - -
Mepo4g02897 601 SUPERFAMILY Protein kinase-like (PK-like) 1 314 IPR011009 -
Mepo4g02897 601 MobiDBLite consensus disorder prediction 383 413 - -
Mepo4g02897 601 MobiDBLite consensus disorder prediction 477 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02897 Mepo-Chr4 37925270 37930100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02897 10 259 MAP Kinase Kinase Kinase AT1G53570 30.588 4.15e-36 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Mepo4g02897 Pkinase 7.1e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02897 K08857 - gmx:100810347 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02897 4 37925270 37930100 Mepo4g02897 4 37925270 37930100 ECH
Mepo3g03059 3 40736752 40743400 Mepo4g02897 4 37925270 37930100 PCT