Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02891 ATGAATTATATGTACTCGGTGAAAGAAGAACACTTAGAACCAACGATTCCACCACCACCCCAACCAAATGAAGGACTTGTTGAAATTAGACCACAACCATTCCTCACAAAAACATTTGATGTAGTTGATGATCAAAGTACCAACCATATAGTTTCATGGAACAGAAGTGGCACCAGCTTTGTGGTTTGGGATACACATGCCTTCTCCAATCATCTCCTTCCCAGATACTTCAAACACAATAATTTCTCAAGCTTTGTCAGACAACTAAACACTTATGGATTTAGAAAAATTGAACCAGATAGATGGGAATTTGCAAATGAAGGATTCCTAAGAGGGCAAAGACATCTGTTGAGGAACATAAGGAGAAAGAAGGGACCTTCTCAGCCTATTGAAGTTGGTTGTGTTGGACTAGATGCAGAAATTGATCGTTTAAGGCAAGAGAAACACGTGTTAATGACGGAGCTTGTGAGTCTTAGAAAGCAGCAATATGATACCACACTGTACCTGCTAGAGATGGAGCAGAGGTTAGAAGGGATAGAAATCAATCAGAAGAAAATGATGTCTTTCTTAGCTAGAGTTATGAAAAACCCTGTCTTCATTCACCAACTACTCCAACAAAAAGAGAAGAAAAAGGAGCTTGAAGAAGTCGTGACCATGACAAAAAAGAGAAGGCTTGTTGAACAAGGAACTAGACTAGGTATTGGACAATCGAGCAGTATTAAAATTGAGCCGTTAGAATTATGTGATTATGAGTTTGGGGTGTCGGAGTTGGAAATGTTAGCTATGGAAATGCAGGTTTTTGGAAGGGGGAAAATAATGGATAAGGAGGAAGTACATGAACCTGAGGCACTAGAATCACAAGAGAAGATGGAAAGAGTGCTTGATGATGAAGGGTTCTGGGAAGATCTAATGTTTAGTATGAAATTTGAGGGTAGATTTGACATTCCAACTTCTGAAGATAACGATGAGAATGAAGATGATTCAAGTGAACCACTGAGTCATGAATTTAGGATTAACTCTTTTCATTCAGTTCACTAG 1038 0.3882 MNYMYSVKEEHLEPTIPPPPQPNEGLVEIRPQPFLTKTFDVVDDQSTNHIVSWNRSGTSFVVWDTHAFSNHLLPRYFKHNNFSSFVRQLNTYGFRKIEPDRWEFANEGFLRGQRHLLRNIRRKKGPSQPIEVGCVGLDAEIDRLRQEKHVLMTELVSLRKQQYDTTLYLLEMEQRLEGIEINQKKMMSFLARVMKNPVFIHQLLQQKEKKKELEEVVTMTKKRRLVEQGTRLGIGQSSSIKIEPLELCDYEFGVSELEMLAMEMQVFGRGKIMDKEEVHEPEALESQEKMERVLDDEGFWEDLMFSMKFEGRFDIPTSEDNDENEDDSSEPLSHEFRINSFHSVH 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02891 345 Coils Coil 141 161 - -
Mepo4g02891 345 SUPERFAMILY "Winged helix" DNA-binding domain 31 123 IPR036390 -
Mepo4g02891 345 Pfam HSF-type DNA-binding 34 123 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo4g02891 345 PRINTS Heat shock factor (HSF) domain signature 85 97 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo4g02891 345 PRINTS Heat shock factor (HSF) domain signature 34 57 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo4g02891 345 PRINTS Heat shock factor (HSF) domain signature 72 84 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo4g02891 345 FunFam Heat shock transcription factor 1 27 124 - -
Mepo4g02891 345 Gene3D - 27 124 IPR036388 -
Mepo4g02891 345 ProSitePatterns HSF-type DNA-binding domain signature. 73 97 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo4g02891 345 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 20 237 IPR027725 -
Mepo4g02891 345 MobiDBLite consensus disorder prediction 314 345 - -
Mepo4g02891 345 Coils Coil 203 223 - -
Mepo4g02891 345 SMART hsfneu3 30 123 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02891 Mepo-Chr4 37867944 37870143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02891 13 304 HSF AT3G22830 50.149 4.30e-100 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mepo4g02891 HSF_DNA-bind 1.8e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02891 K09419 - gmx:100811945 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03063 3 40779805 40782754 Mepo4g02891 4 37867944 37870143 PCT