Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02889 ATGTTCCCTGCACTAATGTCCAATTCCACTTCTTTCTCAGAAGAAACAAATGTCTCTTCTGCTAGATTTAACCACTTAGTTTCAACCATAAATTCCTCACCACAGCCTCAAAAGACCAAGAAAAAAAGAAGCCTCCCTGGTAACCCAGATCCTGATGCTGAAGTGATAGCTTTATCACCAAAGACACTATTAGCAACAAATAGATTTGTGTGTGAGATCTGCAACAAGGGTTTTCAAAGAGATCAAAACCTACAGCTACATAGGAGAGGACATAACCTACCATGGAAGTTGAAGCAAAGGAACAACAAAGATGTTATTAAAAAGAGAGCTTATGTTTGTCCAGAGCCTTCATGTGTTCATCATAACCCTTCAAGGGCTCTTGGAGATCTTACAGGAATTAAGAAACATTATAGTAGAAAACATGGTGAGAAAAAATGGAAATGTGATAAGTGCTCAAAGATCTATGCTGTTCACTCTGATTGGAAAGCTCACTCTAAAACCTGTGGTACTAGAGAATATAAATGTGATTGTGGTACCCTTTTTTCCAGGAAGGACAGCTTCATAACTCATAGAGCATTTTGTGATGCATTAGCTGAAGAAAGTGCAAGAATGTCTGCAAACCAATTAGCCATCACCACCACAAACACAAACCCATTAGTCCAATCTCTCTTCCTCTTCCCAAATCAACAACAAAGCCACATCACCTGGGACCCACCTCAACAAAACCCTAACCCTAGCAACCTTAATAATACTCTTACCAATCCCCTCCACCACAATATCAAGCCTGAATCTCCAAATTTTCACACCAACCTCTCTCCTCCTCCTCCTCTCCCATTTCTTCATCACACAAACCCTAAGAGCATAATGACATCTTCACCCTTCCACGTCAGCACACAACAACCTTCTTCCAGTGCTGCCATGTCACCACACCTCTCAGCAACTGCACTTCTCCAAAAAGCAGCAACAGTCGGTGCCGCCGCCATCACAGGCAGCCAACCACCAATGAGTCATCATCATCAAACCTCTCAGCTCCGCATTGGCCAGTTTGGATCAGTGACTCAGCTAGACTCCGTTGATCACTATATTAACAACATGAGAGGCCGCCTCACCGGAAAGAACGACGACGGTCTCACGAGGGACTTTCTTGGCCTTACCAACGGTGGAGGAAATGGTGGTGACTCCTTGGATGTAAAGGATATGCTAACATTCACTGGGGGTGTAGAATACCACCAACACCAACCTCATCAAAACATGATGATGCTCAAGTCACAGTCACAACAAGCAGGTTTTGGTTTTCTTGGGACAACAACTGTTCCTGAGTCGTGGGGGAACTGTTAG 1338 0.4365 MFPALMSNSTSFSEETNVSSARFNHLVSTINSSPQPQKTKKKRSLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRNNKDVIKKRAYVCPEPSCVHHNPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKIYAVHSDWKAHSKTCGTREYKCDCGTLFSRKDSFITHRAFCDALAEESARMSANQLAITTTNTNPLVQSLFLFPNQQQSHITWDPPQQNPNPSNLNNTLTNPLHHNIKPESPNFHTNLSPPPPLPFLHHTNPKSIMTSSPFHVSTQQPSSSAAMSPHLSATALLQKAATVGAAAITGSQPPMSHHHQTSQLRIGQFGSVTQLDSVDHYINNMRGRLTGKNDDGLTRDFLGLTNGGGNGGDSLDVKDMLTFTGGVEYHQHQPHQNMMMLKSQSQQAGFGFLGTTTVPESWGNC 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02889 445 MobiDBLite consensus disorder prediction 28 51 - -
Mepo4g02889 445 SMART c2h2final6 111 141 IPR013087 -
Mepo4g02889 445 SMART c2h2final6 146 166 IPR013087 -
Mepo4g02889 445 SMART c2h2final6 69 91 IPR013087 -
Mepo4g02889 445 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 19 411 IPR031140 -
Mepo4g02889 445 FunFam protein indeterminate-domain 5, chloroplastic-like 124 203 - -
Mepo4g02889 445 ProSitePatterns Zinc finger C2H2 type domain signature. 71 91 IPR013087 -
Mepo4g02889 445 FunFam protein indeterminate-domain 12-like 48 117 - -
Mepo4g02889 445 Gene3D Classic Zinc Finger 48 118 - -
Mepo4g02889 445 Gene3D Classic Zinc Finger 123 204 - -
Mepo4g02889 445 ProSiteProfiles Zinc finger C2H2 type domain profile. 69 91 IPR013087 -
Mepo4g02889 445 MobiDBLite consensus disorder prediction 28 42 - -
Mepo4g02889 445 SUPERFAMILY beta-beta-alpha zinc fingers 68 166 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02889 Mepo-Chr4 37834903 37838832 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02889 23 409 IDZ Gene Family AT4G02670 50.754 2.37e-121 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo4g02889 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02889 K25870 - gmx:100812496 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02889 4 37834903 37838832 Mepo4g02889 4 37834903 37838832 ECH