Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02865 ATGGCGAATCATCCTTCCGATACACCAGCCGACGATTTCCTTGAACAAATTCTCGGTCTCCCGAATTTCACCTCCGCCGACGGAACCGACGCTTCTCCGATGATGCTTCAGCTTAACTCCGGCGACGCTGCCTCTCACCTTGGCGCTGGAGGAGGATTTCATGCACCGGTTTATCATTTGGGTTTGAGCTTGGACCAAGGTAAAGGAGGAGGGTTTTTGAAGCCTGATGAAGCCTCCGGGAGTGGGAAGCGTTTCCGGGAGGATCTTGTTGATACAAGACCTAAGAATACTTTTCATGGGCAACCCATGCCTTCTACAGTTCCTGCTGCTCCACAACCACCAGCAATGCGTCCTAGAGTGCGGGCAAGAAGAGGACAGGCTACAGATCCCCACAGCATCGCTGAAAGGTTGCGCAGAGAAAGAATAGCTGAAAGAATCAGGGCTTTGCAAGAACTTGTTCCTAGTGTCAACAAGACTGATCGAGCTGCCATGCTAGATGAAATTGTGGATTATGTCAAATTCTTAAGGCTTCAAGTGAAGGTTTTGAGCATGAGTAGATTGGGTGGAGCCGGTGCAGTGGCTCCACTGGTAACTGACATCCCATTATCGTCAGTCGAGGAAGAAGGAAGTGAGAGTGGGAGAAACCAACCAGCTTGGGAGAAGTGGTCTAATGATGGTACTGAAAAGCAAGTAGCTAAGCTCATGGAAGAAAATGTTGGGGCTGCGATGCAGTTTCTTCAATCAAAGGCTCTCTGCATAATGCCCATCTCACTGGCATCTGCAATATACCAATCGCAACCATCAGACAACTCCAGTATAGTTAAGCCTGAAACTATTCCTCCTCCATAG 849 0.49 MANHPSDTPADDFLEQILGLPNFTSADGTDASPMMLQLNSGDAASHLGAGGGFHAPVYHLGLSLDQGKGGGFLKPDEASGSGKRFREDLVDTRPKNTFHGQPMPSTVPAAPQPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSESGRNQPAWEKWSNDGTEKQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPSDNSSIVKPETIPPP 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02865 282 Pfam Helix-loop-helix DNA-binding domain 131 175 IPR011598 GO:0046983
Mepo4g02865 282 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 126 175 IPR011598 GO:0046983
Mepo4g02865 282 FunFam Basic helix-loop-helix transcription factor 121 183 - -
Mepo4g02865 282 MobiDBLite consensus disorder prediction 93 116 - -
Mepo4g02865 282 Gene3D - 121 183 IPR036638 GO:0046983
Mepo4g02865 282 SMART finulus 132 181 IPR011598 GO:0046983
Mepo4g02865 282 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 79 261 - -
Mepo4g02865 282 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 124 185 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02865 Mepo-Chr4 37563179 37567576 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02865 53 281 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 78.723 2.69e-116 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo4g02865 HLH 1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02865 - - gmx:100793177 441.039