Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02863 ATGGAAAACTCTTTGGGGAACCATCAAGCAGAGATGAATCTTAAGGCTACAGAATTAAGGTTGGGATTACCAGGTAGTGATGAAGTAGAAAAACTTCCATGCAATTTTTCTATTCTTAGAAACAACAAGAGATCTTCACCAGAAGCAAGTGATATAGATTCCATGAGCAAGAACAATTTGAATAGTTCTAATGGTTCTTCTCATACCACAAATGATGACCAAGATAATGCTCCTCCTTCAAAGGCACAAGTAGTTGGATGGCCACCAATAAGATCTTATAGGAAGAATAGTTTGCAACAAAAGAAGGGTGAAGAGGTTGGGATGTACTTGAAAGTGAGCATGGCTGGTGCACCTTATTTAAGGAAGATAGATCTCAAAGTTTACAACAGTTACTCAGAACTTCTAAAGGTTTTGGAAAATATGTTCAAGTGTACAATTGGTGAATATTCAGAAAGAGAAGGTTACAATGGATCTGAATTTGTTCCAACTTATGAAGACAAAGATGGTGATTGGATGCTTGTTGGAGATGTTCCTTGGGAAATGTTCATGTCTTCTTGCAAGAGGTTAAGAATTATGAAAGGATCAGAAGCAAAGGGATTGGGTTGTTTTTGA 612 0.3709 MENSLGNHQAEMNLKATELRLGLPGSDEVEKLPCNFSILRNNKRSSPEASDIDSMSKNNLNSSNGSSHTTNDDQDNAPPSKAQVVGWPPIRSYRKNSLQQKKGEEVGMYLKVSMAGAPYLRKIDLKVYNSYSELLKVLENMFKCTIGEYSEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMKGSEAKGLGCF 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02863 203 ProSiteProfiles PB1 domain profile. 107 194 IPR000270 GO:0005515
Mepo4g02863 203 Pfam AUX/IAA family 17 201 IPR033389 -
Mepo4g02863 203 Gene3D - 101 203 - -
Mepo4g02863 203 MobiDBLite consensus disorder prediction 42 86 - -
Mepo4g02863 203 SUPERFAMILY CAD & PB1 domains 104 193 - -
Mepo4g02863 203 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 12 198 IPR003311 GO:0005634|GO:0006355
Mepo4g02863 203 MobiDBLite consensus disorder prediction 42 78 - -
Mepo4g02863 203 FunFam Auxin-responsive protein 102 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02863 Mepo-Chr4 37555140 37556629 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02863 99 200 B3 DNA Binding Superfamily AT2G46530 36.275 1.90e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mepo4g02863 AUX_IAA 4.9e-57 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02863 K14484 - gmx:100780752 299.671