Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02862 ATGGAAGTTGCAGGGCTGAAAAAGGAGGAAAAGATGGTGTTTGAGGAAACTGAACTGAGGCTAGGACTTGGATTGCCAGGCAAAACAACAGAAGTAGTAAGAAAGAGAGGTTTTTCTGAAATTGAGAGTGAAAGTGAAACAAGCACTGTGGATTTGAAGCTTAATCTTTCTACTAAGGAAGGAGCAACAGATCCACAATTTAAGCCAAAGGAGAAGTCTCTTCTGCTCTCTGATTCTGGTGCCAAGCCTCCTGCTAAGGCACAAGTGGTAGGGTGGCCACCAGTGCGGTCATTCCGTAAGAACATGTTTGCTGCCCAAAAGAGCAGTGAAGGATCAGAAGAAAGTGAAAAGAAGAATAGCACTAATAATCCAATAAGCTTTGTGAAAGTTAGCATGGATGGAGCACCTTACCTCCGCAAAGTTGACCTCAAGATGTACAAGAGTTACCCAGAGCTCTCTGATGCCTTAGCCAAAATGTTTAACTCCTTTACCACAGGAAATTGTGAATCCCAAGGCATTCGGGATTTCATGAATGAGAGTAATAAGTTGATGGATCTATTGAACAGCTCCGACTATGTCCCAACTTATGAAGACAAAGATGGCGACTGGATGCTTGTCGGTGATGTACCATGGGAGATGTTTATTGAATCATGCAAGCGTTTACGTATCATGAAAGGAAAGGAAGCCATTGGACTCGCACCAAGAGCCATGGAAAAATGCAAGAACAGGAGCTAG 735 0.434 MEVAGLKKEEKMVFEETELRLGLGLPGKTTEVVRKRGFSEIESESETSTVDLKLNLSTKEGATDPQFKPKEKSLLLSDSGAKPPAKAQVVGWPPVRSFRKNMFAAQKSSEGSEESEKKNSTNNPISFVKVSMDGAPYLRKVDLKMYKSYPELSDALAKMFNSFTTGNCESQGIRDFMNESNKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFIESCKRLRIMKGKEAIGLAPRAMEKCKNRS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02862 244 Gene3D - 119 238 - -
Mepo4g02862 244 FunFam Auxin-responsive protein 100 236 - -
Mepo4g02862 244 ProSiteProfiles PB1 domain profile. 125 226 IPR000270 GO:0005515
Mepo4g02862 244 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 15 231 IPR003311 GO:0005634|GO:0006355
Mepo4g02862 244 Pfam AUX/IAA family 17 235 IPR033389 -
Mepo4g02862 244 MobiDBLite consensus disorder prediction 104 124 - -
Mepo4g02862 244 SUPERFAMILY CAD & PB1 domains 119 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02862 Mepo-Chr4 37523593 37527153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02862 106 234 B3 DNA Binding Superfamily AT4G23980 31.008 2.09e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mepo4g02862 AUX_IAA 9.3e-83 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02862 K14484 - gmx:100780214 331.257