Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02852 ATGGAAGAGGTTGAACAAGCAAGCAGAACAGCTGTTGAAAGCTGTCATAGAGTTCTAAGTATGTTGTCTCAACCAAGGGATCAAGTTCATCATAGGAATTTAACTGTTGAAACTGGTGAAGCTGTGAATAGGTTCAAGAAAGTTGTGTCTTTGCTTCATGGTTTGGATCGTTCAAGAGTTAGGAAGCTTAAAAATCTTCAAAATGTCCCTTATCCTCAAACTGCTTTCTTAGACAACCCAAATTGCAAAAGAACCAACATCAACCATCACACCAAAAATGTTCACTTTACTCAAACTACCTATCCTCAAAATTCAGTTCAGGAACTTGGTTCAACCCTAAGAAATCCACTTTCTGTTGGAAACCCTTCTTTGGAATTGAGTTCGAACGGGAAAAGTCCGCTTCACCTTGCTCAACAAGCTGCATCAACTCACTATCAGTTCTATCAGCCTCAGCAACAGCATCATCACCAGCAGCAGCTGCAGCAACAAAGGTTGTTGTTGCAGCAGCAGCAACAGCAGCAACAAATGAAGCATCAAGCTGAAATGATGTTCCGAAGGAACACTAGCGGCATAAGCCTTAATTTTGACAAGGCCACTAGCAGCACACCAACAATGTCGTCTACTAGGTCTTTCATTTCGTCCTTGAGCATAGATGGAAGCGTGGCAAACGTGGATGGAAGTTCCTTCCATTTGATAGGAGCTCCGATCTCTTCAGATCAGAATTCACAGCACAAGAAGAAATGTTCTGCTAGAGGTGATGAGGGAAGCTTGAAATGTAGTAGCAGTTCTAAATGCCATTGCTCAAAGAAGAGGAAGCATAGAGTGAAGAGATCAATTAAGGTGCCTGCTATCAGCAACAAGCTTGCGGATATCCCTCCTGATGATTACTCGTGGAGGAAGTACGGGCAGAAGCCTATCAAGGGCTCTCCTCACCCTAGGGGGTATTATAAGTGCAGCAGCATGAGAGGCTGCCCTGCTAGGAAGCATGTTGAGAGGTGCTTGGATGAGCCTACTATGCTAATGGTTACCTATGAAGGCGAGCATAATCACGCCAAGGTACCAACACAACCTGCAAATGCATGA 1083 0.4404 MEEVEQASRTAVESCHRVLSMLSQPRDQVHHRNLTVETGEAVNRFKKVVSLLHGLDRSRVRKLKNLQNVPYPQTAFLDNPNCKRTNINHHTKNVHFTQTTYPQNSVQELGSTLRNPLSVGNPSLELSSNGKSPLHLAQQAASTHYQFYQPQQQHHHQQQLQQQRLLLQQQQQQQQMKHQAEMMFRRNTSGISLNFDKATSSTPTMSSTRSFISSLSIDGSVANVDGSSFHLIGAPISSDQNSQHKKKCSARGDEGSLKCSSSSKCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLDEPTMLMVTYEGEHNHAKVPTQPANA 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02852 360 FunFam WRKY transcription factor 65 276 353 - -
Mepo4g02852 360 Pfam Plant zinc cluster domain 245 290 IPR018872 -
Mepo4g02852 360 SUPERFAMILY WRKY DNA-binding domain 290 351 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo4g02852 360 ProSiteProfiles WRKY domain profile. 287 350 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo4g02852 360 SMART WRKY_cls 292 352 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo4g02852 360 Pfam WRKY DNA -binding domain 294 350 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo4g02852 360 Gene3D WRKY domain 277 354 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo4g02852 360 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 356 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02852 Mepo-Chr4 37400099 37402864 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02852 1 356 WRKY Transcription Factor Family AT2G30590 56.364 4.34e-114 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo4g02852 WRKY 7.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02852 - - tpra:123924038 528.094