Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02848 ATGGCAACCAAAGCTTCCAAACCTTCTCACCCTACTTATGAAGAGATGATCAAGGATGCAATTGTGACACTGAAGGAGAGAACAGGTTCAAGTCAAATCGCAATTGCGAAATTCATTGAACAGAAGCACAAACAGCTTCCTTCAAATTTCAAGAAGCTATTGCTTCACAATTTGAAGAAGAACGTTGCTTCTGGAAAGCTTGTTAAGGTTAAAGGTTCATTCAAGCTTTCTCCGGCGACGAAACCATCAGCGGAGAAAAAGCCTGCAGCCGCTAAGCCAAAGACAAAGGCAGTTGCTAAGGTGACGGCAGTGAAGGCCAAGCCCGGCCCTAAGCCCAAGGCTAAAGCTGTTGTCAAAACTAAGGTTGTTGTAAAAGCTAAACCTGTTGCTGCCAAGCCCAAGCCTGCTGCTGCCAAGCCTAAAGCTCCTGCTGCCAAGCCTAAAGCTGCTGCTGCAAAGGCAAAACCTGCTGCCAAGGCGAAGACAGTTGTGAAACCTGCTAAGGCTTCAAGGACGTCGACGAGAACAACTCCGGGAAAGAAAGTTGTTGCTGCTAAGAAGCCAGCAGTGAAGAAAGCTGTGGCTGCCAAGAAAGCTCCGGTGAAGAAAGCTGTGGCTGCCAAGAAGTCTCCGGCGAAGAAAGTTGTGTCGACAAAGAGAGGGGGAAGGAAATGA 675 0.4815 MATKASKPSHPTYEEMIKDAIVTLKERTGSSQIAIAKFIEQKHKQLPSNFKKLLLHNLKKNVASGKLVKVKGSFKLSPATKPSAEKKPAAAKPKTKAVAKVTAVKAKPGPKPKAKAVVKTKVVVKAKPVAAKPKPAAAKPKAPAAKPKAAAAKAKPAAKAKTVVKPAKASRTSTRTTPGKKVVAAKKPAVKKAVAAKKAPVKKAVAAKKSPAKKVVSTKRGGRK 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02848 224 PANTHER HISTONE H1 7 202 - -
Mepo4g02848 224 Pfam linker histone H1 and H5 family 10 77 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mepo4g02848 224 Gene3D - 4 98 IPR036388 -
Mepo4g02848 224 CDD H15 7 91 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mepo4g02848 224 MobiDBLite consensus disorder prediction 185 224 - -
Mepo4g02848 224 SMART h15plus2 7 73 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mepo4g02848 224 SUPERFAMILY "Winged helix" DNA-binding domain 6 88 IPR036390 -
Mepo4g02848 224 MobiDBLite consensus disorder prediction 73 224 - -
Mepo4g02848 224 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 9 78 IPR005818 GO:0000786|GO:0003677|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02848 Mepo-Chr4 37342957 37344038 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02848 14 87 Single Myb Histone (SMH) Gene Family AT1G49950 36.486 1.28e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02848 K11275 - cit:102626409 115.161